Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1706 ATGTTAGAGCCATTAAATTCCCTGGTGGAACCTGGAAGCAAAAAGTCTCGTAAAAAGTCCACCATGCGCTCCAATGACAATGCCGCTGATCAAAATGAATCAACTCCTTCAAACTCAGATTCAGTCCAACACCAAAGGCCTCTGAGCAATCAAGAGAAAACACTCAGAATCTCTGAGGACTTAAATTTTCCTGCACAACCTGAGATTGGTTCCAACATTGAAGGCAACAAAGAATTTGGTCCAATCTGGTTCTGCTTGGTTGCTGCAGAAGAGAAGAAAGCAAGTGCACGACTGCCACAGCTATATTCCAGCTACCTAAGGGTCAAGGATGGTAGTGTAACTGTTTCCTATATTAAAAAGTATCTGGTGAAGAAGCTTGGTCTTGTTAGTGAAGATGAGGTGGAGATCACATTACAAGGTCGAGCACTTTTGTCTTCATTGCAACTGAGAAACCTAGTAGACATGTGGTTGCAAACAGTGCCAAAGAATAAGATTCAGACATCTGTTGGAAGCTCAGCCAAGGATTTTATTATGGTCCTTTCATATGGTCGAAAGACTTGA 561 0.4207 MLEPLNSLVEPGSKKSRKKSTMRSNDNAADQNESTPSNSDSVQHQRPLSNQEKTLRISEDLNFPAQPEIGSNIEGNKEFGPIWFCLVAAEEKKASARLPQLYSSYLRVKDGSVTVSYIKKYLVKKLGLVSEDEVEITLQGRALLSSLQLRNLVDMWLQTVPKNKIQTSVGSSAKDFIMVLSYGRKT* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1706 186 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 1 185 IPR044807 GO:0004842
Gso20g1706 186 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIPH-RELATED 1 185 - -
Gso20g1706 186 MobiDBLite consensus disorder prediction 25 57 - -
Gso20g1706 186 MobiDBLite consensus disorder prediction 1 60 - -
Gso20g1706 186 Gene3D - 67 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1706 Gso-Chr20 47677032 47679303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1706 98 185 C3H Transcription Factor Family AT3G23060 55.056 3.28e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1706 K16277 - gmx:102669950 350.517