Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1684 ATGGGATTCTATCTTAATCTCAAACGCAACGCGTTCCGGCTAAAACGGTTTCTGCTAGGACATGAAGGCAGAAAAAGAAAATACAAACAGGCAAAAAAGCCTTCATGGATGAGGCCAATGGCATATGGTTATCAAGTGGTGGAGCATAACATGGCCAGAGATGGTTCTGATGATTCAGTTGTGGCACAGAGAGAGGAAATGGATCAAACAGAATTATGGTATTTTGGAATCTTTGACGCACTAATTGGAGACAAAGTTACCAAGTACATGCAGTCTTATTTCTTTGACAAGAAGCTTCAAGAGACTCATATAAGGAGAAAAAGCAAGGAAGCTCTAAAGAGAGCTTACCTTGGTGTAAGAGCAACGATCCGAGAGGAACACAAATTAGAGGAGACATGCAGAATGGGTTCAGCATCTGTTATGTTGATCAACGGAGAAAAACTTGTGGTAGCCAACATGGGAGATTACAGAACTGTTGTCTGCAGAGATGGCATAGCTCATCAGACAACTGGCACAAACCAACGATCAACGAAAATACATTGGTCTCGCAGACTCTTTGCAGGACCCATTCTAGCATGTCAATCAGGAAATGCAGCAGGTGCAAAGCATTCTAGAGGTTCTGCTCTTGTCATTAGAAGTGAAAGGATCGATTCTGATACTGAGTTTTTGATATTAGCAAGCACTGGCATATGGGAGGTGATGCAAAACCAAGAGGCCGTGAATCTGATCAGTCACATAGAGGATCCACAAGAAGCAGCTGAATGCTTGGCAAAGGAAGCTCTAATTAGGATGAGCAAAAGCAGCATCTCATGCTTAATCATTCGCTTTGATTGA 834 0.4245 MGFYLNLKRNAFRLKRFLLGHEGRKRKYKQAKKPSWMRPMAYGYQVVEHNMARDGSDDSVVAQREEMDQTELWYFGIFDALIGDKVTKYMQSYFFDKKLQETHIRRKSKEALKRAYLGVRATIREEHKLEETCRMGSASVMLINGEKLVVANMGDYRTVVCRDGIAHQTTGTNQRSTKIHWSRRLFAGPILACQSGNAAGAKHSRGSALVIRSERIDSDTEFLILASTGIWEVMQNQEAVNLISHIEDPQEAAECLAKEALIRMSKSSISCLIIRFD* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1684 277 Pfam Protein phosphatase 2C 213 267 IPR001932 -
Gso20g1684 277 Pfam Protein phosphatase 2C 44 170 IPR001932 -
Gso20g1684 277 ProSiteProfiles PPM-type phosphatase domain profile. 53 276 IPR001932 -
Gso20g1684 277 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 5 276 - -
Gso20g1684 277 SUPERFAMILY PP2C-like 35 277 IPR036457 -
Gso20g1684 277 SMART PP2C_4 30 274 IPR001932 -
Gso20g1684 277 CDD PP2Cc 42 276 IPR001932 -
Gso20g1684 277 Gene3D - 40 277 IPR036457 -
Gso20g1684 277 PANTHER ALPHABET, ISOFORM E-RELATED 5 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1684 Gso-Chr20 47481811 47484401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1684 1 276 PP2C-type Phosphatase Gene Family AT3G23360 47.143 1.58e-81 244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1684 20 47481811 47484401 Gso20g1684 20 47481811 47484401 ECH
Gso20g1684 20 47481811 47484401 Gso10g1655 10 43152500 43155133 GST