Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1680 ATGGCTCCCACCCCTTCTTCGAAACAAAACCACCCCACTCAATTGAAGACTCCACAGTCCAAGCACCGTCTCAACTTCAATGGCCTCAAATCAGCACCTTCTCCGAACCCTAATTCTGTTGCAAACAAGGAACCCCCACCTGAACACCCAATTGAAGTCATTGCCAGAATCCGTGACTACCCAGATCGAAAGGACAAGCCTTTGTCCGTTCTTCAAACCAATTCCAACTCTAGTTCCATTCGGGTTCGTGCCGATTTTGGGTACCGGGACTTCACCCTTGATGGGGTATCCGTGTCTGAGGAGGAGGACTTGGATGTGTTCTATAAGAAGTTTGTTGAGTCAAGGATCCATGGGGTTAAGCTGGGGGACAAGTGCACCATCATGATGTATGGGCCAACTGGTTCTGGGAAGAGTCACACCATGTTCGGGTCGTCGAAGCAGGCAGGGATTGTGTATAGGTCTCTGAGGGACATTCTTGGAGATGGGGATAGTGCAGATGGAGATTCTGGGGGTGGGTTGGGGACTTTTGTTCAAGTCACTGTTTTGGAGATTTACAATGAGGAGATTTATGATCTCTTGTCCACCAATGGAGGAGGTGGGGGAGGAGGATTTGGATTTGGCTGGCCTAAGGGGGGTAGTGCTTCAAAGGTGAAACTTGAAGTGATGGGGAAAAAGGCAAAGAATGCAACCTATATATCTGGAAATGAAGCAGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGAAGGATTGTTAAAAGCACACTTTGTAATGACAGAAGTTCCAGAAGTCACTGCATGGTAATCCTTGATGTTCCAACTGTGGGAGGGCGGCTAATGCTTGTAGACATGGCAGGATCAGAAAATATTGAACAAGCCGGTCAAACTGGATTTGAGGCCAAAATGCAGACTGCAAAAATCAATCAAGGAAATATAGCGCTGAAGAGAGTGGTGGAGTCCATTGCAAATGGCGATTCACATGTGCCTTTTAGGGACAGCAAACTTACCATGCTTCTGCAGGATTCCTTTGAAGATGATAAGTCAAAAATTCTAATGATACTATGTGCAAGTCCTGATCCTAAGGAGATACACAAGACAATCTCTACACTTGAATATGGGGCAAAAGCAAAATGCATAGTCCGTGGACCTCATACTCCAGTCAAGGATGATGAATCTTCTTCAGCTGTCATTTTGGGATCAAGAATTGCTGCAATGGATGAATTTATCTTGAAGCTACAAATGGAAACCAAGCAAAGAGAGAAAGAACGGAACGAAGCCCACAAAAAGCTTTTGAAGAAAGAAGAAGAAATTGCTGCGTTAAGAGCTAAGCTGGACATGGCAGAAGGCAAAGGAACTCCTCCAAGCGAGGAGGAAATTAACCTGAAGGTAAATGAACGAACCCGGCTTCTGAGACAAGAGTTGGAAAAGAAGTTGGAAGAGTGCCAAAGAATGACTAATGAATTTGTTGAATTGGAGAGGAAGAGAATGGAAGAGAGGATACTGCAGCAGCAGGAGGAAGTTGAAACTCTGAGAAGGAGACTGGAAGAGATTGAGTTGCAGCTGTGTTCAAAGCAAGGGTGTTGTGTGGAAAATGAGTCAAAAGACATGGAGTCGAGTGGGTTTATGAGAAGGTTATTGCGTGTTTACAAAAGTGAGGATGATCCTGGAATGGTGAAGTCAATGGATTTGGACATGGATGATCAAGAACCCCTTGGCCACGAGGTAAATATCGTTGGTGGAGTTATGAGCAGGGGTGATTACAATGTTAAGCAGGACTTATCAAATCAACCTTGTCCGAATGCTTTGACTGGTGTAAAAGAAGATGCTCATGTTTTTTCACCAAACTTTGGCCAAAGGGTGTGCCTTAGTACAGTATATGAGGAAGAAGGAGAAGGAGATGAAGACAAAGGGGAAGATGAGGAAGTGGAGAAAGGAGTGATAGAGGAAAAGAGGGTATGTAGTGTTGACAAGCCTAGTGCTGCAGGTTCCTTGGGAACCTTAAACCTGTCTAACACAAGTCCAAACAAAGAGGAATTTTGTTTCAAGGTAAGTTCAGTGGATAATGACTCTAGACTCCTGAGAATTCAAAATATATTCACTCTGTGTGGCAACCAAAGAGAGCTCTCCCAGCACATTGGAACCCCAGTACAACCTACAAAAAAGAGGTCTGATGAAACTTTTGAGTTTTCTCCTGCCAAGACAAGTGACAAGGATTCCGTTTTCAAAATTTCCAACAAGGAGAACTTTGAACCACATAATGTTCTAGGAAATTAG 2277 0.4414 MAPTPSSKQNHPTQLKTPQSKHRLNFNGLKSAPSPNPNSVANKEPPPEHPIEVIARIRDYPDRKDKPLSVLQTNSNSSSIRVRADFGYRDFTLDGVSVSEEEDLDVFYKKFVESRIHGVKLGDKCTIMMYGPTGSGKSHTMFGSSKQAGIVYRSLRDILGDGDSADGDSGGGLGTFVQVTVLEIYNEEIYDLLSTNGGGGGGGFGFGWPKGGSASKVKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPVKDDESSSAVILGSRIAAMDEFILKLQMETKQREKERNEAHKKLLKKEEEIAALRAKLDMAEGKGTPPSEEEINLKVNERTRLLRQELEKKLEECQRMTNEFVELERKRMEERILQQQEEVETLRRRLEEIELQLCSKQGCCVENESKDMESSGFMRRLLRVYKSEDDPGMVKSMDLDMDDQEPLGHEVNIVGGVMSRGDYNVKQDLSNQPCPNALTGVKEDAHVFSPNFGQRVCLSTVYEEEGEGDEDKGEDEEVEKGVIEEKRVCSVDKPSAAGSLGTLNLSNTSPNKEEFCFKVSSVDNDSRLLRIQNIFTLCGNQRELSQHIGTPVQPTKKRSDETFEFSPAKTSDKDSVFKISNKENFEPHNVLGN* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1680 758 PRINTS Kinesin heavy chain signature 122 143 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1680 758 PRINTS Kinesin heavy chain signature 256 273 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1680 758 PRINTS Kinesin heavy chain signature 279 297 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1680 758 PRINTS Kinesin heavy chain signature 329 350 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1680 758 PANTHER KINESIN-RELATED 17 718 IPR027640 GO:0003777|GO:0007018
Gso20g1680 758 MobiDBLite consensus disorder prediction 1 38 - -
Gso20g1680 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 387 IPR027417 -
Gso20g1680 758 SMART kinesin_4 48 388 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1680 758 ProSiteProfiles Kinesin motor domain profile. 50 380 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1680 758 Coils Coil 415 451 - -
Gso20g1680 758 PANTHER KINESIN-LIKE PROTEIN KIF22 17 718 - -
Gso20g1680 758 Coils Coil 465 521 - -
Gso20g1680 758 MobiDBLite consensus disorder prediction 1 49 - -
Gso20g1680 758 MobiDBLite consensus disorder prediction 713 758 - -
Gso20g1680 758 Gene3D Kinesin motor domain 30 383 IPR036961 -
Gso20g1680 758 Pfam Kinesin motor domain 72 380 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1680 Gso-Chr20 47461102 47464660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1680 105 392 Calmodulin-binding Proteins AT5G65930 27.723 3.78e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1680 - K10398 gmx:100779567 1390.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1680 20 47461102 47464660 Gso20g1680 20 47461102 47464660 ECH
Gso20g1680 20 47461102 47464660 Gso10g1659 10 43170317 43173906 GST