Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1648 ATGGCACAGAAAAGAGTTTCTCATGTGCTTGTATGCAGAGAGTTAAAGCCACACCTGCTAATGGTCATAGTCCAGGTGGGCTATACCTTCTTATATTTCATCACTGAAGCCTCCTTCAATCATGGTATGAGCCCTCATGTGTACGTAACCTATCGGCATATTCTGGCTGCGGCTATGATGTTCCCTTTTGCATACTTTTTGGAGAGAAATGCAAGACCAAAGCTGACATTTGCTCTTTTCATGGAAATTTTTGTGCTTTCTCTGTTAGGGGTTAGTGTGACTCTTAATATGTACTTTGCAAGCCTGAACTACACAAATCCGACCTTTGTTGCTTCCATGGTCAACACCATAGCTTCCCTTACCTTCATCATTGCAGTGGCACTCGGGTTTGAGGTTCTTGATCTTCGAAATCCTCGTGGTATAGCAAAAGTTATTGGGACCATGATCTCCTTAGCTGGTGTTTTGATCATGACACTGTACAAAGGACCAGTTATGAGAAATTTATGGCATCCTCTAATCCATATTCCAGGGAAAAGTGCTGCTATAAATGAAGACTGGTTAAAGGGTTCAATTCTTACGGTTTCAAGTTGTGTTACATGGTCTGTATGGTACATTATGCAGAAGTCAATTAAGCGCTAA 639 0.4147 MAQKRVSHVLVCRELKPHLLMVIVQVGYTFLYFITEASFNHGMSPHVYVTYRHILAAAMMFPFAYFLERNARPKLTFALFMEIFVLSLLGVSVTLNMYFASLNYTNPTFVASMVNTIASLTFIIAVALGFEVLDLRNPRGIAKVIGTMISLAGVLIMTLYKGPVMRNLWHPLIHIPGKSAAINEDWLKGSILTVSSCVTWSVWYIMQKSIKR* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1648 212 PANTHER WAT1-RELATED PROTEIN 15 210 - -
Gso20g1648 212 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Gso20g1648 212 Pfam EamA-like transporter family 20 158 IPR000620 GO:0016020|GO:0016021
Gso20g1648 212 PANTHER WAT1-RELATED PROTEIN 15 210 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1648 Gso-Chr20 47057733 47063472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1648 16 212 Nodulin-like Gene Family AT5G07050 40.291 1.22e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1648 - - gmx:100789540 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1648 20 47057733 47063472 Gso10g1695 10 43642489 43645386 GST