Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1629 ATGGAGCGTTTAGAGAACGTGATTTCAGACACAATCCTCTACGATCCCTCCAACATAGGGTTAGGTTCCTTGGTGGACACTCTCCTCTCCGACTTGGACCAAACCATGTCGTTACCCTCACACTACCATCTCTCATCAGACCTTCCCGATTTCGCCACCACCGTGGAAGAACACTCCGGGATACGACTCATTCACACGCTGATGACGTGTGCGGATTCCCTGCAACGTGGCCACTTCTCATTCGCTGCCTCCCTCATCCAGAACATGCAAGGCTTGTTGGCGCACGTCAACACCAACTGCGGCATCGGAAAAGTCGCCGCCTGCTTCATCGACGCCTTGCGCCGCCGCATCTCCAACAAGTTTCCAGCATCATCCGCTTACGAGAATGACGTTCTCTACCACAACTACTACGAGGCGTGTCCTTACTTGAAGTTCGCGCACTTCACCGCGAACCAGGCGATCTTGGAGGCCTTCAACGGCCACGATTGCGTCCACGTCATCGACTTCAACCTCATGCAGGGGCTCCAGTGGCCAGCGCTGATACAGGCGCTGGCGCTCCGGCCCGGCGGACCGCCGCTGCTGAGGCTCACCGGCATCGGGCCCCCCTCGGCGGAAAACCGCGACAACCTCCGCGAAATCGGGCTGAGACTCGCCGAGCTGGCGCGCTCCGTGAACGTGCGGTTTGCGTTCCGCGGCGTGGCGGCGTGGCGGCTGGAGGACGTGAAGCCGTGGATGTTACAGGTGAGTCCGAACGAAGCAGTAGCGGTGAACTCGATCATGCAGCTGCACCGGCTGACGGCGGTGAAGTCCGCCGTTGAAGAGGTTCTGGGATGGATCCGGATTCTGAACCCTAAAATCGTGACGGTTGTGGAACAAGAAGCCAACCACAACGGGGAAGGGTTTTTGGAGCGGTTCACGGAGGCTTTGCATTACTATTCCAGCGTTTTCGACTCGCTCGACGCGTGTCCGGTCGAACCGGACAAGGCTGCTTTGGCGGAGATGTATCTGCAGAGGGAGATATGCAACGTGGTGTGCTGCGAGGGACCGGCGCGGCTGGAGCGCCACGAGCCGCTCGCTAAGTGGAGGGATCGGCTGGGGAAAGCCGGCTTCAGAGCCTTGCATTTGGGTTTCAACGCCTACAAGCAAGCCAGCATGTTGCTCACTCTCTTCTCAGCTGAGGGTTTCTGCGTCCAAGAGAATCAAGGCTCTTTGACTCTGGGTTGGCATAGCCGCCCCCTAATTGCAGCTTCGGCTTGGCAAGCCGCGCCTCTGGGAGACGACGAAACGCTGCGTTTTGAGCATTGA 1305 0.5862 MERLENVISDTILYDPSNIGLGSLVDTLLSDLDQTMSLPSHYHLSSDLPDFATTVEEHSGIRLIHTLMTCADSLQRGHFSFAASLIQNMQGLLAHVNTNCGIGKVAACFIDALRRRISNKFPASSAYENDVLYHNYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPLLRLTGIGPPSAENRDNLREIGLRLAELARSVNVRFAFRGVAAWRLEDVKPWMLQVSPNEAVAVNSIMQLHRLTAVKSAVEEVLGWIRILNPKIVTVVEQEANHNGEGFLERFTEALHYYSSVFDSLDACPVEPDKAALAEMYLQREICNVVCCEGPARLERHEPLAKWRDRLGKAGFRALHLGFNAYKQASMLLTLFSAEGFCVQENQGSLTLGWHSRPLIAASAWQAAPLGDDETLRFEH* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1629 434 Pfam GRAS domain family 63 420 IPR005202 -
Gso20g1629 434 ProSiteProfiles GRAS family profile. 54 420 IPR005202 -
Gso20g1629 434 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 424 IPR005202 -
Gso20g1629 434 PANTHER OS05G0574900 PROTEIN 46 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1629 Gso-Chr20 46835061 46836773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1629 57 420 GRAS Transcription Factor Family AT1G14920 53.784 1.38e-139 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso20g1629 GRAS 1.1e-122 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1629 K14494 - gmx:100785293 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1629 20 46835061 46836773 Gso10g1715 10 43878633 43880599 GST