Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1600 ATGTCGTCGCGGCAAGTGGTGAAGCGTGCCAAATACAAAACCACTGTCAAAGACCCTGGCACCCCCGGCGTCCTCAAATTGACTCAAGATAAGTTCGTTTTCAAGCCGAATGATCCTACCTCGAAAACCAAGCTCGATGTGGAGTTCAGATTTATTCAGGGTCATAAAGTCACTAAAGAGGGATCAAAGAAACCAGCATGGCTTAATCTTATCCATGCACAGGGAAGTTACATCTTTGAGTTAGAAACTTTTTCAGATCTTCATGTTTGCCGGGAATTGGTGGGTGTTGCCCTTAACAAGCAAGTGCCTGGAGAAGCTACAAAAGTTATTTCTGAGGAACAGCTGAGCCCTGCTGAAATGGCACTGAAGATAAAGCTATTGCAGGAAGATAGCAAGTTGCAGAGGCTTCATAAGGAACTTGTGGCTAGTGGTAAGCTTACAGAATCAGAATTTTGGGCTACAAAGAAGAAAATGCTGGATCAAGATGAAAGCAGAAAGTTAAAACAACAGATTGGTTTTAAAAATTCTTTGATCTTTGACACAAAGCCTATGAGTGATGGACGGATAAACCAGGTTAAATTTCAGTTGACGCCAGAGATAAAATATCAGATTTTTGCCCTCAAACCTGCCGTCCACCAGGCATTCCTGAATTTTGTACCTAGGAAAATGAATGAGGTAGATTTCTGGAATAAATACTTCAAAGCTGAGTATCTCCATAGCACCAAAAATGCTGTTGCAGCAGCTGCTGAGGCTGCTGAAGATGAGGATCTTGCTGTTTTTCTGAAAGATGATGAGATATTGGAAATTGAAGCTCGAAAGAAGGTTCGACGGGTTGATCCAACTTTAGACATGGAAGCAGACCAAGGAGATGATTACACACATCTTCCTGATCATGGGATTTTCCGAGACGGTAGCAAGGATATATCTGAAGCCCAAAATTCTTTGTATAAGAGAACATTGTTGCAAGATCTTAATAGACAAGGTGCAGTTGTTCTTGAAGGAAAAACTTTAGATATGGAGATGGAACACCCAAGAACAGTAGCAGAAATTCTTGCTCGGAGAAAACAGGAATGTGATGGGGTTGTAGATGAGGAGAGACAAAACAGAATTTCTAAGATGACCCTGATTGATGATCTTCAGGCACAAGATAATCATCCGTATGCACCACTCTGTATCAAGGATCCTCGTGACTATTTTGATTTCCAACAAGCTAATGCTGTAAAAACTTTGGATGATTCTCAAACTGGAATGGAGCAAATGAAATGCAGTTTGGGTTCTGAGGAAGCCTATGGCTCTTTGAGGGCATCAATATCTAAAATAAAAACTACAGGATTAAGGGATCCTCTCTTTAGTCCTGATGTTGCTCTTAAGGTCCTTAACGGATTGACTAAAAATATCTCAAGTCCCAAATATCATCTTGGGAGAAGTTCTCAAGGTAGTGTCCTTGATATATTGCCCAATACAACTAAGGAGACACTACTAGATCATTGGGTGTGCAGTCAGGAATTGCTGAGGCACTTTTGGTCTTCATATCCAATTACAACACAGAACCTTGTTAATAAGACACGAAGACTGAAAGAATCCATATCACAAATATATTCTAAACTTGAGGACATAAAGGTATCTGCTGAGTCAGACCTGCGACACCATGTTTCCCTTGTTGTCCATCCTATGCAGCAGGCTCTGAATGCTGCCTTGTTACACTATGAGGCTGACATTAGGAAAAGAAATGCAAGAGGACAGAAGCCTAACGGTTATGTTTAG 1764 0.4104 MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDKFVFKPNDPTSKTKLDVEFRFIQGHKVTKEGSKKPAWLNLIHAQGSYIFELETFSDLHVCRELVGVALNKQVPGEATKVISEEQLSPAEMALKIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKMLDQDESRKLKQQIGFKNSLIFDTKPMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPRKMNEVDFWNKYFKAEYLHSTKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGIFRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMEHPRTVAEILARRKQECDGVVDEERQNRISKMTLIDDLQAQDNHPYAPLCIKDPRDYFDFQQANAVKTLDDSQTGMEQMKCSLGSEEAYGSLRASISKIKTTGLRDPLFSPDVALKVLNGLTKNISSPKYHLGRSSQGSVLDILPNTTKETLLDHWVCSQELLRHFWSSYPITTQNLVNKTRRLKESISQIYSKLEDIKVSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNARGQKPNGYV* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1600 587 SMART wurzfinal6 179 240 IPR005607 -
Gso20g1600 587 SMART wurzfinal6 109 163 IPR005607 -
Gso20g1600 587 ProSiteProfiles BSD domain profile. 105 163 IPR005607 -
Gso20g1600 587 SUPERFAMILY BSD domain-like 188 242 IPR035925 -
Gso20g1600 587 Pfam BSD domain 190 243 IPR005607 -
Gso20g1600 587 ProSiteProfiles BSD domain profile. 188 240 IPR005607 -
Gso20g1600 587 SUPERFAMILY PH domain-like 6 97 - -
Gso20g1600 587 SUPERFAMILY BSD domain-like 114 159 IPR035925 -
Gso20g1600 587 PANTHER TRANSCRIPTION INITIATION FACTOR IIH-RELATED 4 576 IPR027079 GO:0000439|GO:0006289|GO:0006351
Gso20g1600 587 Gene3D - 117 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1600 Gso-Chr20 46549573 46562166 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1600 20 46549573 46562166 Gso10g0514 10 5650296 5652746 GST