Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1582 ATGAGTTCATCTAACCAGTTAAACCAGAGCAGCAGGTTCCTAGCAAATAAACCAAGGAATGAGGTTAATGTGCAGGGATACACCTTCAGAATTGATGGAAACACAACATTTGTGATGAACTATGGACGTTGGTCAGAAAAGCTCATGAAGCACTATTTTGAACTCTTCGAGATGAAAACAAGTGCTGCAAATTTAGATGTCTTCAGTGTTGTTTCTGCTATTTGGTGCACAACAGCTGAACGCAATTTGTTGTGGATTGGAGGCTTTCGCCCTTCTCAATTGCTTCAGGTTATTCTGCCTCAAGTTCAGCATTCATGCTCCCAGCAACAACTTTCTGATATTTTTAGTTTTGTACAATCCTGTCAACAAGCAGAAGATGCTCTTGCACAAGGCATGGAAAAACTCCAGCAAAACCTTGACAAAGCAACAGCAGCTGGTGACAAAGCATTAAAACTGACGTGTGTCTCACAACAAATGTCATTTTTAAAGCAGGCCAATCATGTTCGCCAGCAATTCTTGTATCAATTATCTCGTCTCCTTACAATTTGTCAGTATGCTGAATTCTTACTTGCCTTCGGAGAATGCCTCTATAACTCCCAGCCTTGGAGCTCACTTTGA 618 0.411 MSSSNQLNQSSRFLANKPRNEVNVQGYTFRIDGNTTFVMNYGRWSEKLMKHYFELFEMKTSAANLDVFSVVSAIWCTTAERNLLWIGGFRPSQLLQVILPQVQHSCSQQQLSDIFSFVQSCQQAEDALAQGMEKLQQNLDKATAAGDKALKLTCVSQQMSFLKQANHVRQQFLYQLSRLLTICQYAEFLLAFGECLYNSQPWSSL* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1582 205 PANTHER TRANSCRIPTION FACTOR TGA9 47 205 - -
Gso20g1582 205 PANTHER TRANSCRIPTION FACTOR TGA9 1 47 - -
Gso20g1582 205 Coils Coil 125 152 - -
Gso20g1582 205 ProSiteProfiles DOG1 domain profile. 1 205 IPR025422 GO:0006351|GO:0043565
Gso20g1582 205 Pfam Seed dormancy control 46 99 IPR025422 GO:0006351|GO:0043565
Gso20g1582 205 PANTHER FACTOR BZIP PROTEIN, PUTATIVE-RELATED 1 47 - -
Gso20g1582 205 PANTHER FACTOR BZIP PROTEIN, PUTATIVE-RELATED 47 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1582 Gso-Chr20 46411542 46414571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1582 46 194 Calmodulin-binding Proteins AT5G10030 51.266 6.61e-47 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1582 K14431 - gmx:100527435 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1582 20 46411542 46414571 Gso10g1760 10 44241574 44246370 GST