Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1573 ATGGGAATTGCAGTGGGAGGGGTTGATTTGCTGAGTGAAAAAGCGGCGATGATGAGAGAGTGTCTGCAGAAGAGTGAAACCATCACAGACAACGTCGTCACCATTCTCGGTTCATTCGACCACCGTCTCTCCGCCCTCGAAACCGCCATGCGTCCAACTCAGATTAGAACTCACTCTATTAGGAAGGCTCATGAGAATATTGATAGGACTTCGAAGGTTGCGGAGGTTATATTGGCTCACTTCGATCAATATCGTCAGGCAGAGGCAAAAATACTTAAAGGGCCACATGAAGACTTGGAAAACTATCTTGAAGCAATAGATAAGTTGAGAAGCAACATTCAGTTTTTTGGTAGTAAGAAGGGTTTCAAGAGTAGTGATGGCATTGTCGTGCATGCTAATAATTTGCTAGCTAAGGCTATTTCAAAGCTAGAAGATGAGTTTAGGCAGTTATTATTATCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGACTGCCTTCCAAACTCAATGCGACCTTCATCACCTGGCCATGAGGGTGATCCTAGTGGCAAGAATCACCATTCTGAGTCTCACAACAATAATGCTGAGGCTGTTGTATACACACCTCCTGCTCTTATACCACCAAGATTTTTGCCACTGCTACATGATTTAGCTCAGCAAATGGTTGAAGCTGGTCACCAACAACAGTTACTCAAAATATACAGGGATGCCCGTTCTAATGTATTGGAAGAGAGCCTCCAAAAACTTGGAGTGGAGAAACTCAACAAAGATGATGTTCAAAAGCTGCAGTGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTCAGTGAACAGTGCTTTGCGGAGGTGACTACAAACAGTGTCTCTATGCTACTCAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCCCCGGAAAAATTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAACTTCATTCAGAGATTGAAACTCTTTTTAAAGGCAAAGCTTGCTCTGCAATAAGAGAAGCTGCAACTAGTTTGACAAAACGTCTTGCACAAACAGCTCAGGAGACCTTTGGAGATTTTGAAGAGGCAGTTGAGAAAGATGCTACAAAGACTGCAGTAACAGATGGAACTGTCCATCCTCTAACAAGCTATGTAATTAACTATGTGAAGTTTTTATTTGACTACCAATCCACCTTGAAGCAACTTTTTCAGGAATTTGAAGGTGGTGATGATTCTTCACAGCTAGCATCTGTAACTGTGCGAATAATGCAAGCTTTGCAAACCAATTTAGATGGGAAATCAAAGCAGTATAAAGACCTTGCGTTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGGTCTGAAGCCAAGGATTTGCTGGGGGATGATTGGGTACAACGACATAGGAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGCCTATCTATTCAGGGCCTTACCTCATCAGGTGGTGGGAGTGGTACTGCTGGTGGTGACGGTGGAACTGGAAGCAGTAGTGGTGCTTCAAGAGCAATTGTGAAAGACAGGTTTAAGGCATTCAATATTATGTTTGAGGAACTCCATCAGAAACAATCGCAATGGACAGTTCCAGACTCCGAGTTGCGAGAATCTCTTAGGCTAGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCATTTGTCAAACGATTTGGGCCTCTAGTGGAGAGTGGAAAGAATCCTCAGAAGTACATCAAATACTCAGCAGAAGATCTAGACCGAATGTTGGGTGAATTTTTTGAAGGAAAAAACATGAGTGAAACCAAGCGGTAA 1947 0.4222 MGIAVGGVDLLSEKAAMMRECLQKSETITDNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTSKVAEVILAHFDQYRQAEAKILKGPHEDLENYLEAIDKLRSNIQFFGSKKGFKSSDGIVVHANNLLAKAISKLEDEFRQLLLSYSKPVEPERLFDCLPNSMRPSSPGHEGDPSGKNHHSESHNNNAEAVVYTPPALIPPRFLPLLHDLAQQMVEAGHQQQLLKIYRDARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACSAIREAATSLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFEGGDDSSQLASVTVRIMQALQTNLDGKSKQYKDLALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSGTAGGDGGTGSSSGASRAIVKDRFKAFNIMFEELHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKNPQKYIKYSAEDLDRMLGEFFEGKNMSETKR* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1573 648 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 644 IPR004140 GO:0000145|GO:0006887
Gso20g1573 648 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 644 - -
Gso20g1573 648 SUPERFAMILY Cullin repeat-like 77 639 IPR016159 -
Gso20g1573 648 MobiDBLite consensus disorder prediction 165 192 - -
Gso20g1573 648 Coils Coil 648 648 - -
Gso20g1573 648 Pfam Exo70 exocyst complex subunit 274 635 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso20g1573 648 Gene3D Exocyst complex component Exo70 75 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1573 Gso-Chr20 46350823 46361428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1573 8 648 EXO70 exocyst subunit family AT5G03540 76.048 0.0 995
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1573 K07195 - gmx:100813987 1226.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1573 20 46350823 46361428 Gso20g1573 20 46350823 46361428 ECH
Gso20g1573 20 46350823 46361428 Gso10g1771 10 44307735 44316935 GST