Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1534 ATGGACACTATACTAAGTACAACGTTGTTCCTCATGTTGACATGCTCCATCATGCATGTTCTTCGTTCACTGCATGCAAGAATCAGAAGAAAATCAAACTACAATCTTCCACCAGGACCCTCTCTTCTCACCATCATCAGAAACTCCGTACAACTCTACAAAAAGCCGCAGCAGACAATGGCCAAGCTTGCCAAAACCTACGGCCCCATAATGCGCTTCACCATAGGCCAATCAACCACCATAGTAATCTCCTCAATAGAAGCCACCAAAGAGATTCTCCAAACCCATGAATCCTTATTCTCGGACAGAACAAACCCCGACATCACAACCTCGTACAACCACAACCGTTACAGCCTGGTCTTCCTCCCTGTCTCACCCCTCTGGCAAGAACTGAGGAAAATCTGCCACGGAAACTTGTTTTCCGCAAAGACCCTTGACGCAAGCACGGAGCTTAGGCGCATGAAAATGAAGGAGCTTCTCACCGATATCCGCCAAAGAAGCCTCAACGGCGAAGTGGTGGATATTGGAAGAGCAGCGTTCATGGCATGCATTAACTTTCTGTCTTACACGTTTCTCTCTCTGGATTTTGTTCCCTCTGTAGGTGATGGCGAGTACAAGCACATAGTGGGGACTCTCTTGAAAGCAACTGGGACCCCGAACTTGGTGGATTATTTTCCCGTGTTGAGGGTGTTTGATCCACAAGGGATTCGGAGGCACACCACCAACTACATTGACAAGTTGTTCGATGTGTTGGACCCTATGATTGATGAACGCATGAGGAGGAGGCAAGAGAAGGGTTATGTCACTAGCCATGACATGTTAGATATCTTGCTGGATATTTCTGACCAGAGTAGCGAGAAGATTCATAGGAAGCAGATCAAGCATTTGTTCCTCGACCTGTTCGTTGCGGGGACTGATACAACAGCGTACGGTCTAGAAAGAACAATGACGGAACTAATGCACAACCCAGAAGCCATGTTAAAAGCGAAGAAGGAGATAGCAGAAACAATCGGAGTAGGAAACCCCGTGGAGGAATCCGACGTGGCGAGGCTGCCATACCTGCAAGCAGTGATAAAAGAGTCTCTGCGAATGCACCCACCAGCCCCGCTTCTGCTGCCACGCAGGGCCAAAACGGACGTGCAAGTGTGTGGCTACACGGTCCCAGAGGGGGCCCAAGTCCTCATCAACGAGTGGGCCATAGGGAGGAACCCTGGCATATGGGACAAAGCGCATGTGTTCTCGCCAGAAAGATTCTTGCACTCTGACATAGACGTCAAGGGTCGCCACTTCAAGCTCACGCCCTTCGGGAGTGGCAGACGCATTTGCCCTGGCTCGCCACTCGCCGTCAGAATGCTCCACAACATGCTCGGCTCCTTGATCAACAACTTTGACTGGAAGCTTCAGAACAACATGGACCCCAAGGACATGGACTTGGATCAGTCCCTCATGGCTATCCCTCTCGCCACAGCTTAA 1473 0.501 MDTILSTTLFLMLTCSIMHVLRSLHARIRRKSNYNLPPGPSLLTIIRNSVQLYKKPQQTMAKLAKTYGPIMRFTIGQSTTIVISSIEATKEILQTHESLFSDRTNPDITTSYNHNRYSLVFLPVSPLWQELRKICHGNLFSAKTLDASTELRRMKMKELLTDIRQRSLNGEVVDIGRAAFMACINFLSYTFLSLDFVPSVGDGEYKHIVGTLLKATGTPNLVDYFPVLRVFDPQGIRRHTTNYIDKLFDVLDPMIDERMRRRQEKGYVTSHDMLDILLDISDQSSEKIHRKQIKHLFLDLFVAGTDTTAYGLERTMTELMHNPEAMLKAKKEIAETIGVGNPVEESDVARLPYLQAVIKESLRMHPPAPLLLPRRAKTDVQVCGYTVPEGAQVLINEWAIGRNPGIWDKAHVFSPERFLHSDIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHNMLGSLINNFDWKLQNNMDPKDMDLDQSLMAIPLATA* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1534 490 Pfam Cytochrome P450 37 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1534 490 SUPERFAMILY Cytochrome P450 29 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1534 490 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1534 490 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1534 490 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1534 490 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1534 490 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1534 490 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1534 490 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1534 490 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1534 490 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 488 - -
Gso20g1534 490 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 488 - -
Gso20g1534 490 Gene3D Cytochrome P450 22 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1534 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Gso20g1534 490 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1534 490 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1534 490 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1534 490 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1534 Gso-Chr20 45917998 45921923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1534 1 482 Cytochrome P450 AT2G45550 41.429 4.94e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1534 - - gmx:100800810 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1534 20 45917998 45921923 Gso10g1812 10 44728104 44732350 GST