Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1528 ATGTTAACACACAGAACAGAGAAACAAAACAAACATCCCTTAACTGCACGTTTGATGACGGAAATCGTTACAGCCTCCGTCATAACGTCGTCTCTGATTCCTCCGTCACAAACCCTAACCCTAACCCTAACTAACCCTAAGTCCCTAATCCCTCTTTCTCTTGGTGGTCACCGAAGCTACCCTCTCCTCGACTATCCCTCCCACGCGCAGCCGCACCTCCACGCTCCCACGCGCCACCACTTCCTTTCCTCCTCCTCCTCCAGTCCCACCACTCTCCCCGCCGCCGACATCGCCACCGCCGACTACTACCCACACGCCTCCTCCTTCTCCGACGACTCCGCCAAATCCAACTCCAAACGCGCCTCCGCCGCCGGCAGCCCCTACTACAACAAGAAGCTCAAATCCACCACCGATTCGGTTCCAGCGACCGATTACTCGAAGGACCGCGAAGAATGGAGCGACACGGCGATCGCGTGTCTGTTGGAGGCGTACACGGAGAAGTTCAACTTGCTGTACCGCGGCAACCTCCGCAGCCGCGACTGGGAGGAGGTGGCGGAGGCGGTGGGGGGACGGTGCGGCGGAGAGGGGAAGCATCAGAAGAGCGTGGAGCAGTGTAAGAATAAGATTGATAATTTGAAGAAGAGGTATAAGGTGGAGCTTCAGAAAATTGGGAGTGGTGGCATTGTCTGTGAAAACTGTTTCTGA 705 0.5617 MLTHRTEKQNKHPLTARLMTEIVTASVITSSLIPPSQTLTLTLTNPKSLIPLSLGGHRSYPLLDYPSHAQPHLHAPTRHHFLSSSSSSPTTLPAADIATADYYPHASSFSDDSAKSNSKRASAAGSPYYNKKLKSTTDSVPATDYSKDREEWSDTAIACLLEAYTEKFNLLYRGNLRSRDWEEVAEAVGGRCGGEGKHQKSVEQCKNKIDNLKKRYKVELQKIGSGGIVCENCF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1528 234 Gene3D - 152 218 - -
Gso20g1528 234 PANTHER URIDYLATE KINASE 92 228 - -
Gso20g1528 234 PANTHER KINASE, PUTATIVE-RELATED 92 228 - -
Gso20g1528 234 Coils Coil 195 222 - -
Gso20g1528 234 Pfam Myb/SANT-like DNA-binding domain 149 223 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1528 Gso-Chr20 45855335 45856102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1528 152 227 Trihelix Transcription Factor Family AT3G14180 47.368 1.15e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso20g1528 Myb_DNA-bind_4 7.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1528 - - gmx:106797796 460.299