Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1514 ATGGAGGAAGGGGTGGATGCAGATGAAGTGGTGAGGTCAGTGAGCAGCTTGAGGATGAGCATAGGGTCTATGAGCAGGAGGAGTTGGGTTTCAGCAAGTGTTTCTGAGATGTGGGGTGCTGGACATGGTGGAGATGTTTTTGAAAGAAGCACTAGAGTGGATGATGGTGATAATGATGAAGAGGAGCTCATGTGGGCTGCCATAGAGAGGCTTCCAACATTTGAGAGGCTTAGGAAAAGCATAGTCAAAAGGGCTTTGGAAGAGAGTGGAAGGTTCAATTATGAAGAGGTTGATATATCCAATCTTGGTTTTCAGGACAAGAAGAAACTCCTTCATGCCATTCTAAGGAAGGTTGAAGTTGACAATGAAACATTTCTCCGTAGGATAAGGGAGAGGATTGATAGAGTCGCTATAGAGATTCCAAAAGTTGAAGTCCGATTTGAGCATTTGTTTGTGGAAGGAGATGCATTTAATGGAACCAGAGCACTGCCAACCTTAGTGAACTCCACCATGAATGCGATAGAGAGAATTCTTGGATCAATTAATCTTCTTCCATCAAAGAGAAGTGTTATCAAGATACTCCAAGATGTTAGTGGAATTGTCAAGCCTGCAAGATTGACCTTGCTTTTGGGGCCTCCAAGATCAGGAAAAACTACACTGCTGCAAGCACTTGCGGGGAAACTGGATAGGGATTTAAGGGTATCCGGAAGAGTCACTTACTGTGGTCATGAATTATCAGAATTTGTTCCTCAAAGAACATGTGCTTATATTAGTCAGCATAATCTTCATCATGGAGAGATGACAGTCCGAGAGACGTTGGACTTTTCTGGACGCTGCTTGGGAGTTGGAACAAGGCATGAACTACTACTAGAACTGATAAAGAGAGAAAAGCAATCAGGACTCAAACCAGATCCAGAGATAGATGCTTTCATGAAAGCCACAGCAGTGGAAGGTCAAGAAACAAGTCTCATTACAGATTATGTTCTCAAGGTTCTTGGATTGGAAATATGTGCTGATACTTTGGTAGGAGATGAGATGAGGAGAGGAATATCTGGTGGAGAAAAAAAGAGGTTAACTACTGGTGAGATGCTGGTAGGACCTGCAAAAGTTTTCTTAATGGATGAGATTTCAACTGGTTTGGATAGTTCCACAACCTTCCAAATTGTCAAGTTCTTGAGGCAGCTAGTGCATGTCATGGATGTTACAATGATAATCTCTCTTTTACAGCCTGCACCAGAAACATATGACCTTTTTGATGACATCATCTTGCTTTCAGAAGGCCACATTATCTACCAAGGTCCACGTGAGAATGTTCTCAATTTTTTTGAGAGTGTAGGCTTCAAATGCCCCGAAAGGAAAGGAGTTGCAGACTTCTTACAGGAGGTTACTTCCAGAAAGGAGCAAGAGCAGTACTGGTTCGCAAGGGACAAACCATACCGTTATGTCAGCGTGCCCGAGTTTGTTGCTCACTTCAACAATTTTGGCATTGGCCAACAACTTTCCCAAGATCTTCAGGTTCCTTATGACCGTGCCGAAACTCATCCTGCTGCATTGGTTAAAGATAAATATGGGATCTCAAAACTAGAACTCTTCAAGGCATGCTTTGCAAGAGAGTGGCTACTGATGAAGCGCAGTGCTTTCGTATACATATTTAAGACTACTCAGATTATGATAATGTCTTTGATTACCATGACAGTGTTTTTTAGGACAGAAATGAGAAGTGGTCACCTTGAAGATGGGAGAAAATATTATGGTGCACTGTTTTTTAGCCTCACTAATATAATGTTCAATGGAATGGCTGAGCTTTCATTGACTATTTTTAGACTTCCCGTTTTCTTCAAGCAGAGAGATTCATTATTTTTTCCAGCATGGGCTTTTGCAATTCCCATATGGATCTTTCGAATTCCTCTCTCTTTTGTGGAGTCAGGATTATGGGTTGTCCTTACTTATTACACAGTAGGGTATGCTCCAGCTCCAAGTAGATTTTTTCGTCAGTTATTAGCATTCTTCTGCTCTCATCAAATGGGTATGTCTCTGTTCCGATTCATTGCTGCTCTTGGAAGAACACTAGTTGTGGCAAACACATTTGGTTTCTTTGTACTGCTACTTGTTTATGTGCTTGGTGGGTTCATTATTGCCAAAGATAACCTTGAGCCTTGGATGAAATGGGGCTATTATATTTCTCCTATGATGTACGGTCAGAACGCCATTGCCATCAATGAATTTCTCGACGAGAGATGGAGCGCTCCCAACACGGACCATAGAATTCCTGAGCCCACAGTTGGGAAGGCTCTTCTCAGGATTAGAAGCATGTTTACTGAAGACTATTGGTACTGGATTTCTATTGGTGCTCTACTAGGCTTTTCTCTGCTTTTCAACATTTGCTTTATAATTGCTCTTACATTTCTGAATCCATATGGAGATTCTAAATCTATTATTCTGGAGGAGGAGAATGAGAAAAAGGGAACTACAGAAGACAGTTCTGCTTCAACTGATAAATCATTTGAAAATGCAGACATTGATATGGCAGAAAAAAACACCCGAGAGAGTTCAATTCCCAAAGCAGGCACTGCAACAACCAAGAGGGGAATGGTGTTACCCTTCAAGCCTCTATCACTTGCTTTTGATCACGTGAATTACTACGTCAATATGCCAACTGAAATGGAAAAACATGGAGTTGAAGGGAGTCGGCTTCAACTACTAAGAGATGTCAGTGGTGCTTTCAGGCCTGGAGTACTAACAGCATTAGTAGGTGTAACTGGTGCTGGAAAAACCACATTGATGGATGTTCTAGCTGGACGGAAAACTGGTGGTTATATTGAAGGAAGCATCAGCATATCTGGTTACCCAAAAAAACAAGCAACTTTTGCTCGGATTAGTGGATATTGTGAACAAAATGATATCCATTCTCCACGTATCACAGTGTATGAATCTATTCTGTTTTCTGCTTGGCTGCGTCTTGGTAAGGAGGTCAAGAGAGAGATAAAGAAGATGTTTGTCGAGGAAGTTATGAACCTTGTTGAGCTACATCCAGTGAGAGATTTTCAAGTAGGCCTTCCTGGAATAGATGGTTTATCAACTGAACAAAGAAAGAGACTCACCATTGCAGTAGAATTGGTTGCCAATCCTTCTATCATCTTTATGGATGAGCCAACCTCCGGCCTTGACGCTAGAGCTGCAGCAATTGTTATGCGTGCTGTTAGAAATACAGCGGATACAGGGAGAACTATTGTCTGCACAATTCATCAACCAAGCATTGACATATTTGAATCTTTTGATGAGCTGCTTTTGATGAAGAGAGGAGGACAAATCATATATAATGGTCCCTTAGGTCAACAATCTCAGAATCTTATAGCCCACTTTGAGGCTTTCCCGGAAGTTCCTAGAATCAAAGATGGTTATAATCCTGCCACATGGGTTTTGGAGATCAGTACTCCAGCAGTTGAGAGTCAGCTTAGAGTAGACTTTGCAGAATTCTACACAAAATCAGAATTGTATCAGAGGAATCAAGAACTTATTAAAGAGCTAAGCACACCTTTAGAGGGAACAAAGGACCTTGATTTCCCTACTAAATACTCCCTTTCCTTTATCACTCAATGTATAGCTTGCTTCTGGAAACAGCACTTGTCCTACTGGAGGAATCCACAGTATAATGGCATCCGGTTATTCATGGCAATATCTATAGGTGTTATTTTTGGACTCATTTTCTGGAAAAAAGGAAACCAAACAGATACGGAGCAAGATCTTATGAATTTAATGGGAGCTATTTTTGCTGCTGTTTTCTTTCTTGGAGGCTCCAACACTTCCACTGTTCAACCCATAGTTGCAATTGAAAGAACAGTCTTCTACCGTGAAAGAGCAGCTGGAATGTACTCAGCTCTACCTTATGCAATTGCTCAGGTGGCAATAGAATGTATTTATGTTGCAATCCAGACATTTACCTTCAGTCTTATCCTTTTCTCAATGATGGGGTTCCTTTGGCGAGTTGACAAGTTCTTGTGGTTCTACTTCTTCATGTTCATTTCATTTGTCTACTTCACACTTTATGGCATGATGACTGCGGCTCTGACACCAAATCCTCAAATTGCTGCAATTGTTATGGCCTTCTTTTTAGTGTTTTGGAACGTATTCTCAGGTTTCATTATCCCAAAATCGCAAATTCCAATATGGTGGAGGTGGTTTTACTGGGTGTGTCCAACTGCCTGGAGTGTATATGGCCTAGTGACATCCCAGGTGGGTGACAAAGATACTCCTATTCTGGTACCTGGATCAGAACCAATGACAGTGAAAGCATTCCTTGAGGAAGAGTTCGGCTATGAATATGGCTTCCTCGGAGTTGTTGCTGTGGCTCATATTGCATTTGTTGCGTTGTTTCTTTTTGTTTTTGCATATGGTATCAAAGTCTTTAATTTCCAGAAGAGATAA 4425 0.4133 MEEGVDADEVVRSVSSLRMSIGSMSRRSWVSASVSEMWGAGHGGDVFERSTRVDDGDNDEEELMWAAIERLPTFERLRKSIVKRALEESGRFNYEEVDISNLGFQDKKKLLHAILRKVEVDNETFLRRIRERIDRVAIEIPKVEVRFEHLFVEGDAFNGTRALPTLVNSTMNAIERILGSINLLPSKRSVIKILQDVSGIVKPARLTLLLGPPRSGKTTLLQALAGKLDRDLRVSGRVTYCGHELSEFVPQRTCAYISQHNLHHGEMTVRETLDFSGRCLGVGTRHELLLELIKREKQSGLKPDPEIDAFMKATAVEGQETSLITDYVLKVLGLEICADTLVGDEMRRGISGGEKKRLTTGEMLVGPAKVFLMDEISTGLDSSTTFQIVKFLRQLVHVMDVTMIISLLQPAPETYDLFDDIILLSEGHIIYQGPRENVLNFFESVGFKCPERKGVADFLQEVTSRKEQEQYWFARDKPYRYVSVPEFVAHFNNFGIGQQLSQDLQVPYDRAETHPAALVKDKYGISKLELFKACFAREWLLMKRSAFVYIFKTTQIMIMSLITMTVFFRTEMRSGHLEDGRKYYGALFFSLTNIMFNGMAELSLTIFRLPVFFKQRDSLFFPAWAFAIPIWIFRIPLSFVESGLWVVLTYYTVGYAPAPSRFFRQLLAFFCSHQMGMSLFRFIAALGRTLVVANTFGFFVLLLVYVLGGFIIAKDNLEPWMKWGYYISPMMYGQNAIAINEFLDERWSAPNTDHRIPEPTVGKALLRIRSMFTEDYWYWISIGALLGFSLLFNICFIIALTFLNPYGDSKSIILEEENEKKGTTEDSSASTDKSFENADIDMAEKNTRESSIPKAGTATTKRGMVLPFKPLSLAFDHVNYYVNMPTEMEKHGVEGSRLQLLRDVSGAFRPGVLTALVGVTGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQATFARISGYCEQNDIHSPRITVYESILFSAWLRLGKEVKREIKKMFVEEVMNLVELHPVRDFQVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTADTGRTIVCTIHQPSIDIFESFDELLLMKRGGQIIYNGPLGQQSQNLIAHFEAFPEVPRIKDGYNPATWVLEISTPAVESQLRVDFAEFYTKSELYQRNQELIKELSTPLEGTKDLDFPTKYSLSFITQCIACFWKQHLSYWRNPQYNGIRLFMAISIGVIFGLIFWKKGNQTDTEQDLMNLMGAIFAAVFFLGGSNTSTVQPIVAIERTVFYRERAAGMYSALPYAIAQVAIECIYVAIQTFTFSLILFSMMGFLWRVDKFLWFYFFMFISFVYFTLYGMMTAALTPNPQIAAIVMAFFLVFWNVFSGFIIPKSQIPIWWRWFYWVCPTAWSVYGLVTSQVGDKDTPILVPGSEPMTVKAFLEEEFGYEYGFLGVVAVAHIAFVALFLFVFAYGIKVFNFQKR* 1475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1514 1474 PANTHER ATP-BINDING CASSETTE TRANSPORTER 12 1474 - -
Gso20g1514 1474 Gene3D - 183 481 IPR027417 -
Gso20g1514 1474 Pfam ABC transporter 901 1053 IPR003439 GO:0005524
Gso20g1514 1474 Pfam ABC transporter 194 376 IPR003439 GO:0005524
Gso20g1514 1474 MobiDBLite consensus disorder prediction 817 836 - -
Gso20g1514 1474 Pfam ABC-2 type transporter 409 461 IPR043926 GO:0140359
Gso20g1514 1474 CDD ABCG_PDR_domain1 175 433 IPR034001 -
Gso20g1514 1474 CDD ABCG_PDR_domain2 870 1108 IPR034003 -
Gso20g1514 1474 Pfam ABC-2 type transporter 530 742 IPR013525 GO:0016020|GO:0140359
Gso20g1514 1474 Pfam ABC-2 type transporter 1198 1410 IPR013525 GO:0016020|GO:0140359
Gso20g1514 1474 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 12 1474 - -
Gso20g1514 1474 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 873 1126 IPR003439 GO:0005524
Gso20g1514 1474 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 178 451 IPR003439 GO:0005524
Gso20g1514 1474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 451 IPR027417 -
Gso20g1514 1474 Pfam Plant PDR ABC transporter associated 747 813 IPR013581 -
Gso20g1514 1474 Pfam ABC-transporter N-terminal 119 168 IPR029481 -
Gso20g1514 1474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 897 1113 IPR027417 -
Gso20g1514 1474 SMART AAA_5 910 1102 IPR003593 -
Gso20g1514 1474 SMART AAA_5 203 428 IPR003593 -
Gso20g1514 1474 Gene3D - 887 1120 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1514 Gso-Chr20 45693683 45707081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1514 898 1085 Calmodulin-binding Proteins AT2G36910 28.000 5.87e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1514 K08711 - gmx:100786666 2885.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1514 20 45693683 45707081 Gso10g1830 10 44964362 44979639 GST