Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1472 ATGGCAACACATGAAATGGATCCCGATGTTGTTCGCTGGGGTCTTCATCTCCTAGATGTCTGCACACTTTCTCACCATGGTTCCCCTAGTATTGTAACTCAATATGATCCTGATTTAAGTCGAGTTGAATATGTTACCGAAGGCTTTTGTCAGCATGAGTACGTGGATAATGATGAGGCTGTTGCACGAGCATATCAAGAAGAATTATCGCAACTTGATTCCATGGGAGCTTCTGGGATATCCAATTTTGAGAATGAAGGAATGCAAGGATCTGTCTATACACAAGATTGGCCTCAATCCTCAAATGGAAATTATAACTTTGGCAATGAGTCTTGCCAGAACTCTGTAGATGAGTCCTATAATATGAAAGAAGTGGAGAATTATGGTCCAACTCCAAGTGAAAGAGAAAATGGCATGCATGAAAATGATGTTTATGGTTCGTCTTCTGGATCAGTAGAGGTACCTGTTATTAGTGATGACTTCTGGGATTCATTGGAAATATCGGATGAATCTTCTCTTGACGGTGAAGTTGGCAAAAGATTAAACCAGATGGTTCCCATTCCTCATGTTCCTAAAACCAATGAAAAAATACCATCTGATGATGAAGAAATATCAGATCATCAAAGGCTTCTAGACAGATTGCAGTTATATGATCTGATTGAATGCAAGGTTCAAGGAGATGGTAACTGCCAGTTCCGTTCATTATCAGATCAACTCTATCGTTCTCCGGACCACCACAAATTTGTGCGGCAGCAAATTGTTCAACAGGTTCGTTGGTGTACATCATATTTCCTGTTGAGTGGACTGCCTTATGTTCATTGGAGTGGCGAATGGGGTGATCATGTCACGTTGCAGGCTGCTGCAGATTGGTATGGTGTCAAAATTTTTGTTATTACGTCTTTTAAGGACACATGTTACATCGAGATTCTTCCACAGATACAGAAGTCTGGAAGAGTGATATTTCTGAGCTTTTGGGCAGAAGTTCATTACAACTCAATTTATCCGGAAGGAGAACTGCCGTCATCTCATACAAAGAAAAAGAAGAAATGGTGGAATTTCGGTGGCTAG 1068 0.4064 MATHEMDPDVVRWGLHLLDVCTLSHHGSPSIVTQYDPDLSRVEYVTEGFCQHEYVDNDEAVARAYQEELSQLDSMGASGISNFENEGMQGSVYTQDWPQSSNGNYNFGNESCQNSVDESYNMKEVENYGPTPSERENGMHENDVYGSSSGSVEVPVISDDFWDSLEISDESSLDGEVGKRLNQMVPIPHVPKTNEKIPSDDEEISDHQRLLDRLQLYDLIECKVQGDGNCQFRSLSDQLYRSPDHHKFVRQQIVQQVRWCTSYFLLSGLPYVHWSGEWGDHVTLQAAADWYGVKIFVITSFKDTCYIEILPQIQKSGRVIFLSFWAEVHYNSIYPEGELPSSHTKKKKKWWNFGG* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1472 355 Gene3D - 200 340 - -
Gso20g1472 355 PANTHER OTU-LIKE CYSTEINE PROTEASE DOMAIN CONTAINING PROTEIN 22 353 - -
Gso20g1472 355 PANTHER OTU DOMAIN CONTAINING PROTEIN 22 353 - -
Gso20g1472 355 ProSiteProfiles OTU domain profile. 219 336 IPR003323 -
Gso20g1472 355 SUPERFAMILY Cysteine proteinases 201 335 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1472 Gso-Chr20 45028948 45035516 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1472 - - gmx:100820379 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1472 20 45028948 45035516 Gso20g1472 20 45028948 45035516 ECH
Gso20g1472 20 45028948 45035516 Gso10g1877 10 45647559 45654775 GST
Gso2g0577 2 6037988 6039268 Gso20g1472 20 45028948 45035516 PCT