Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1456 ATGCGGTCAATTCCTTTGGGAACCTCAGTATCTCCAACTCCTATAAACACCTCAAAGTTATCACCTTTCAGTGTTAATTTTAAGAAGCCAACCACCTTTCCATCTCGGGGTTCAACTCCTCCTCATGAATTCTCTCTCTCCCAATCAGGATTATGCAGAGCGAGTCAAGTTGTTGATTTGTTCCCAACTGTGTCTCCTGAAATTATTGTGCGGGAGGCCAGGTTAGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCTGAATATTCCTTCCCTTTAGATTTTGTGCTGAGGATGGACAGATTGGTGGCCATGATGGCAGGATTCACTCTACCAAACGGTTACAAGAGAATCTGTTTGGTTGCTGTTATTGGCAACTCATTTGGTGAAACTTTATTATTTGGAAGTGAAGATTTCAAGGTTGGTGGTTTTGATGGGAAAATCAGCCTCAACAAGGGATATGTGGCTGGTATATTAACAGTGGATACTGTTGCAGACTTTCTGCCTAGGAAGGGACCATTGCGACAGAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTCCGAGAAAAATTTAGGCGGAAGGGAATAGCTAAACACTTGGTTGCAAAGGCAGAATCACAAGCCAGAAGTTGGGGGTGTCGTGCTATTGCATTGCACTGTGATTTGAAAAACCCTGCAGCCACAAAGTTATACCAAGGCCAAGGTTTCAGGTGTATCAAGGTTCCAGAGGGAGCTAACTGGCCACAACCAAAGACCTCACCGGATATGAAGTTTAACTTCATGATGAAACTTCTCAACAGCTCAACTGTTTCTAAATGA 837 0.4409 MRSIPLGTSVSPTPINTSKLSPFSVNFKKPTTFPSRGSTPPHEFSLSQSGLCRASQVVDLFPTVSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMMAGFTLPNGYKRICLVAVIGNSFGETLLFGSEDFKVGGFDGKISLNKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKHLVAKAESQARSWGCRAIALHCDLKNPAATKLYQGQGFRCIKVPEGANWPQPKTSPDMKFNFMMKLLNSSTVSK* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1456 278 Pfam Acetyltransferase (GNAT) family 159 242 IPR000182 GO:0016407
Gso20g1456 278 Gene3D - 66 246 - -
Gso20g1456 278 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 275 - -
Gso20g1456 278 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 68 253 IPR016181 -
Gso20g1456 278 CDD NAT_SF 184 225 - -
Gso20g1456 278 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 68 272 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1456 Gso-Chr20 44838242 44841070 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso20g1456 Acetyltransf_1 2.7e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1456 - - gmx:100816118 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1456 20 44838242 44841070 Gso20g1456 20 44838242 44841070 ECH
Gso20g1456 20 44838242 44841070 Gso10g1894 10 45837133 45840428 GST
Gso2g0614 2 6368023 6371346 Gso20g1456 20 44838242 44841070 PCT
Gso20g1456 20 44838242 44841070 Gso2g0614 2 6368023 6371346 PCT