Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1445 ATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCCGAGTCGCTTGGGTCTGTCGCCAGATGGAGGGATTCCTCGCACCACCGCGACTTCAACCGCTGGGGATCCGCCGAGTTTCGCCGACCGCCAGGTCATGGTAAGCAGGGTGGTTGGCACCTGTTTTCCGAGGAATCTGGTCATGGGTATGCGATTTCTCGGTCCAGCAGCGACAAGATGCTGGAAGATGATAGTCGGCCGTCGTTCTCGCGGGGTGATGGGAAGTATGGCAGGAGCAGTAGGGAAAATAGAGGAGGGCCCTTTGGTCAGAGAGATTGGCGAGGGCATTCATGGGAGCCCAGCAATGGTTCTATTAGTTTTCCCAGGAGGCAGCAGGATGTGAACAATGACCATAGGTCAATAGATGATGCCCTAGCGTATTCCCCTCATCCACATTCTGATTTCGGGAACGCTTGGGATCAGCACCACTTGAAAGACCAGCATGATAAGATGGGTGGTGTCAATGATTTCGGAGCTGGCCCAAGATGTGATAGAGAGAACTCTCTGGGTGACTGGAAGCCACTTAAATGGACCCGCTCTGGAAGTTTGTCATCTCGAGGCTCAGGTTTTAGCCACTCAAGTAGCTCAAGGAGCATGGGAGGAGCAGATTCCCATGAAGCGAAGGCCGAGTTGCTACCCAAAAGTGTGGCTGTTAATGAGTCGCATTCAGGGGAAGCAGCTGCTTGTGCCACATCTTCTGTGCCATCTGAGGATACAACTTCTAGAAAAAAGCCTAGGCTGGGTTGGGGGGAGGGACTTGCAAAGTATGAGAAGAAGAAAGTCGAGGTGCCTGAAGCAAGTGCAAACAAAGATGGTCCTGTCTTGTCTACTAGCAACACAGAACCTTGTAATCTCCTCAGTCCCAGCTTAGTTGATAAAAGCCCAAAAGTTATAGGATTCTCAGAATGTGCATCTCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCTGGTATGGATGATAAATTATTTGGGAAGACCGCAAATGTGGACAATGATGTTAGTAATTTGACTGGTTCACCTGCTCCTGTGTCTGAAAATCATTTTGCGAGGTTTTCTTTTAACTTAGAGAAATTTGATATCGACTCCTTGAATAATTTGGGTTCTTCAATTATTGAGTTGGTACAATCTGATGATCCAACTTCTCTGGATTCTGGTCCAATGAGGTCCAATGCAATTAACAAGTTACTGATATGGAAAGCTGACATTTCAAAGGTGTTGGAGATGACTGAATCTGAAATAGATTTACTTGAAAATGAACTGAAGTCACTAAAATCTGAATCTGGGGAAACATGCCCTTGTTCATGTCCAGTAGCCTTGGGCTCCCAGATGGTAGGTGGTGATGAAAAATACGGTGAAGAACATGTTGGAGTCTCTGATCAGGTCATCCGGCCATTACCGCTGAAAGTTGTTGATGATCCCAATACGGAGAAGATGCCCCTTTCAACTAACTTACATAGTATTCATGAAAATGGCAAGGAAGAGGACATTGATAGTCCTGGGACAGCTACTTCTAAATTTGTTGAGCCTTTGCCTTTAATTAAAGCAGTTTCTTGTGATACCAGGGGATATGATAACTTCTCCAGGGACTTGGATGCTGTTCAGTCTACAGCTGTGAAATGCCTAGTTCCCTGTACTACTAGGAAAGAAGCTAGTGTGTCTACTTTTGTTGATGGCAATACTTCTATGGCGCTAAAGGATAGCATGGATATTTTATATAAAACAATTATTTCTTCCAATAAAGAATCCGCCAACAGAGCTAGTGAGGTATTTGATAAGTTATTGCCCAAAGATTGTTGCAAGATTGAGAAGATGGAGGCAAGCAGTGACACATGCACTCATACCTTCATCATGGAAAAATTTGCTGAGAAAAAGCGGTTTGCAAGATTTAAGGAGAGAGTTATTGCACTTAAGTTCAGAGCCTTGCATCACCTATGGAAAGAAGATATGCGCTTACTGTCTATCAGGAAATGCCGACCAAAATCTCACAAAAAAAATGAACTAAGTGTGCGATCTACCTGTAATGGTATCCAGAAGAATCGATTGTCCATTCGATCACGTTTTCCCTTTCCTGCAGGAAATCAACTAAGCTTGGTTCCAACATCAGAGATAATTAATTTTACAAGCAAACTGCTTTCAGAATCCCAAGTTAAAGTGCAGAGTAACACCCTGAAAATGCCGGCATTAATTTTGGATGAAAAAGAGAAGATGATTTCCAAGTTTGTATCCAGTAATGGGCTGGTTGAAGATCCCTTGGCTATTGAGAAAGAAAGGGCTATGATCAATCCTTGGACCCCAGAAGAGAGAGAAGTTTTCTTGGAGAAATTTGCTGCCTTTGGAAAAGATTTTCGGAAAATTGCTTCTTTTCTTGACCACAAGACAGCGGCTGACTGTGTTGAATTCTACTACAAAAATCATAAATCTGATTGTTTTGAGAAAATTAAGAAGCAAGATGGTTGTAAGCTTGGGAAGTCATATTCAGCAAAAACTGACTTGATTGCATCAGGTAACAAAAAATTGCGTACAGGAAGCTCACTTTTGGGTGGATATGGTAAAGTGAAGACATCAAGGGGTGAGGACTTCATAGAGAAATCAAGTAGTTTTGACATTCTTGGGGATGAAAGAGAAACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTTTCATCCGAGGCTATGAGTTCCTGCATAACAAGTTCAGTTGATCCTGTAGAAGGTAACAGGGATAGGAAGTTCCTGAAAGTAAACCCTTTATGCAAACCACCCATGACACCTGATGTTACTCAAGATGTTGATGATGAGACTTGCTCAGATGAGAGCTGTGGTGAAATGGATCCTACAGATTGGACTGATGATGAGAAGACTGCTTTTCTTCAGGCTGTATCATCCTTTGGGAAGGATTTTGCCAAGATAGCACGGTGTGTTGGGACAAGGTCCCAAGAACAGTGCAAAGTTTTCTTTAGCAAGGGCCGGAAATGCCTTGGATTAGATCTCATGCGCCCAATACCTGAGAATGTTGGATCCCCGGTTAATGATGATGCAAATGGGGGTGAGAGTGACACAGATGATGCATGTGTTGTTGAGACAGGCTCGGTGGTTGGAACTGATAAGTCAGGCACTAAAACAGATGAGGACCTGCCTTTGTATGGCACAAACACATACCATGATGAATCCCATCCTGTGGAAGCTAGGAACCTGTCAGCTGAATTAAATGAATCAAAGGAAATTATTGGGACAGAAGTAGATCTTGAAGATGCAAATGTCACTTCTGGTGCTTATCAAATCAATATTGATTCTGAACAGGGCTGTGATGGTAGTGAAGTTTTCTTGTGTGTTTCTAACAAGTCTGGATCTGTTGGTGAACAAGCAGGTATAATTATGTCAGATAGCACAGAAGTTGGAAAAGATAAAGCAAATAAATTGGGAGGTGCAGCTACAGAATTAATTTCTGCTCCAGATTCAAGTGAACCATGCGAGAGTAATTCTGTTGCTGAGGATAGAATGGTCGTTTCCGAGGTTTCTTCTGGTGGTCTTGGAAATGAATTGGAGAGGTATAGAGTGTCTGCTACCCTATGTGTTGATGATAGAGATAATAAATATGAAGCTGATTCAGGTGTTATAGTTGATTTGAAAAGCTCTGTGCATGATTTAAGCACTATGGTAAATTCTTCACTCTCATCTTTGGGCACTTCTTGTTCAGGATTGAGTTTTTGTTCTGAAAATAAGCATGTGCCCCTTGGAAAGCCTCATGTCTCTGCATTGTCTATGGACGATCTTCTTGCAACTTCAAACTCATTGTTGCAAAATACAGTTGCTGTTGATGTTCAATGTGAGAAAACAGCTAGCCAAGATCAAATGTCCTCTACTTGTGATATTCAGGGAGGTAGAGATATGCACTGTCAGAATTCCATTAGCAATGCTGGCCATCAGCTCCCTATTACTGGGAATTTATCAGACCATGTTGATGCTGTTAGCATTCTCCAGGGATATCCCTTTCAAGTTCCTTTGAAGAAAGAAATGAATGGCGATATGAATTGCAGCAGTTCAGCAACTGAATTGCCTTTTCTGCCCCATAAGATTGAACAGGATGATGATCATATCAAAACATTCCAGTCGTCAGATTCAGATAAAACATCCAGAAATGGTGATGTGAAACTGTTTGGGAAGATACTAACCAATCCTTCAACCACACAGAAACCTAATGTGGGTGCTAAAGGGAGTGAAGAAAATGGCACCCATCATCCTAAGTTAAGCAGCAAGTCTTCTAATCTGAAATTTACTGGCCATCATAGTGCTGATGGAAATTTGAAAATTTTGAAGTTTGACCATAATGATTATGTTGGCCTTGAAAATGTTCTTGAAAATGTTCCCATGAGGAGTTATGGTTATTGGGATGGGAACCGAATACAGACTGGTCTCTCGACATTGCCTGATTCTGCCATCTTGCTAGCAAAGTATCCTGCTGCCTTCAGTAATTATCCCACATCTTCTGCCAAATTGGAGCAACCATCATTGCAGACATATTCCAAGAATAATGAACGGCTCCTGAATGGTGCACCCACTTTGACGACAACTAGAGACATCAATGGCAGCAATGCTGTGATTGATTATCAGGTGTTTAGAAGGGATGGTCCAAAAGTGCAACCATTTATGGTAGATGTCAAGCACTGCCAAGATGTATTCTCTGAGATGCAGAGAAGAAATGGATTCGAAGCAATCTCAAGTTTACAGCAGCAGAGCAGGGGAGTGATGGGAATGAATGGTGTTGGAAGACCGGGGATTCTTGTGGGAGGATCGTGCAGTGGGGTCTCAGATCCTGTGGCTGCAATCAAAATGCATTATTCCAATTCTGACAAGTATGGTGGTCAGACTGGGAGTATTGCAAGAGAGGATGAATCATGGGGAGGGAAAGGGGATTGA 4995 0.431 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSAEFRRPPGHGKQGGWHLFSEESGHGYAISRSSSDKMLEDDSRPSFSRGDGKYGRSSRENRGGPFGQRDWRGHSWEPSNGSISFPRRQQDVNNDHRSIDDALAYSPHPHSDFGNAWDQHHLKDQHDKMGGVNDFGAGPRCDRENSLGDWKPLKWTRSGSLSSRGSGFSHSSSSRSMGGADSHEAKAELLPKSVAVNESHSGEAAACATSSVPSEDTTSRKKPRLGWGEGLAKYEKKKVEVPEASANKDGPVLSTSNTEPCNLLSPSLVDKSPKVIGFSECASPATPSSVACSSSPGMDDKLFGKTANVDNDVSNLTGSPAPVSENHFARFSFNLEKFDIDSLNNLGSSIIELVQSDDPTSLDSGPMRSNAINKLLIWKADISKVLEMTESEIDLLENELKSLKSESGETCPCSCPVALGSQMVGGDEKYGEEHVGVSDQVIRPLPLKVVDDPNTEKMPLSTNLHSIHENGKEEDIDSPGTATSKFVEPLPLIKAVSCDTRGYDNFSRDLDAVQSTAVKCLVPCTTRKEASVSTFVDGNTSMALKDSMDILYKTIISSNKESANRASEVFDKLLPKDCCKIEKMEASSDTCTHTFIMEKFAEKKRFARFKERVIALKFRALHHLWKEDMRLLSIRKCRPKSHKKNELSVRSTCNGIQKNRLSIRSRFPFPAGNQLSLVPTSEIINFTSKLLSESQVKVQSNTLKMPALILDEKEKMISKFVSSNGLVEDPLAIEKERAMINPWTPEEREVFLEKFAAFGKDFRKIASFLDHKTAADCVEFYYKNHKSDCFEKIKKQDGCKLGKSYSAKTDLIASGNKKLRTGSSLLGGYGKVKTSRGEDFIEKSSSFDILGDERETAAAADVLAGICGSLSSEAMSSCITSSVDPVEGNRDRKFLKVNPLCKPPMTPDVTQDVDDETCSDESCGEMDPTDWTDDEKTAFLQAVSSFGKDFAKIARCVGTRSQEQCKVFFSKGRKCLGLDLMRPIPENVGSPVNDDANGGESDTDDACVVETGSVVGTDKSGTKTDEDLPLYGTNTYHDESHPVEARNLSAELNESKEIIGTEVDLEDANVTSGAYQINIDSEQGCDGSEVFLCVSNKSGSVGEQAGIIMSDSTEVGKDKANKLGGAATELISAPDSSEPCESNSVAEDRMVVSEVSSGGLGNELERYRVSATLCVDDRDNKYEADSGVIVDLKSSVHDLSTMVNSSLSSLGTSCSGLSFCSENKHVPLGKPHVSALSMDDLLATSNSLLQNTVAVDVQCEKTASQDQMSSTCDIQGGRDMHCQNSISNAGHQLPITGNLSDHVDAVSILQGYPFQVPLKKEMNGDMNCSSSATELPFLPHKIEQDDDHIKTFQSSDSDKTSRNGDVKLFGKILTNPSTTQKPNVGAKGSEENGTHHPKLSSKSSNLKFTGHHSADGNLKILKFDHNDYVGLENVLENVPMRSYGYWDGNRIQTGLSTLPDSAILLAKYPAAFSNYPTSSAKLEQPSLQTYSKNNERLLNGAPTLTTTRDINGSNAVIDYQVFRRDGPKVQPFMVDVKHCQDVFSEMQRRNGFEAISSLQQQSRGVMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSDKYGGQTGSIAREDESWGGKGD* 1665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1445 1664 MobiDBLite consensus disorder prediction 78 110 - -
Gso20g1445 1664 MobiDBLite consensus disorder prediction 1645 1664 - -
Gso20g1445 1664 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1640 - -
Gso20g1445 1664 Coils Coil 422 449 - -
Gso20g1445 1664 MobiDBLite consensus disorder prediction 1061 1081 - -
Gso20g1445 1664 MobiDBLite consensus disorder prediction 949 974 - -
Gso20g1445 1664 CDD SANT 785 827 IPR001005 -
Gso20g1445 1664 ProSiteProfiles SANT domain profile. 972 1012 IPR017884 -
Gso20g1445 1664 ProSiteProfiles SANT domain profile. 781 832 IPR017884 -
Gso20g1445 1664 MobiDBLite consensus disorder prediction 1415 1430 - -
Gso20g1445 1664 SUPERFAMILY Homeodomain-like 971 1020 IPR009057 -
Gso20g1445 1664 MobiDBLite consensus disorder prediction 17 269 - -
Gso20g1445 1664 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1640 - -
Gso20g1445 1664 MobiDBLite consensus disorder prediction 956 971 - -
Gso20g1445 1664 CDD SANT 974 1012 IPR001005 -
Gso20g1445 1664 Pfam Myb-like DNA-binding domain 973 1012 IPR001005 -
Gso20g1445 1664 Pfam Myb-like DNA-binding domain 785 826 IPR001005 -
Gso20g1445 1664 SMART sant 782 830 IPR001005 -
Gso20g1445 1664 SMART sant 970 1018 IPR001005 -
Gso20g1445 1664 Gene3D - 947 1025 - -
Gso20g1445 1664 SUPERFAMILY Homeodomain-like 769 829 IPR009057 -
Gso20g1445 1664 MobiDBLite consensus disorder prediction 199 222 - -
Gso20g1445 1664 MobiDBLite consensus disorder prediction 118 132 - -
Gso20g1445 1664 MobiDBLite consensus disorder prediction 1415 1451 - -
Gso20g1445 1664 MobiDBLite consensus disorder prediction 157 173 - -
Gso20g1445 1664 Gene3D - 762 834 - -
Gso20g1445 1664 MobiDBLite consensus disorder prediction 17 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1445 Gso-Chr20 44660360 44669050 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso20g1445 Myb_DNA-binding 7.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1445 - - gmx:100810588 3283.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1445 20 44660360 44669050 Gso20g1445 20 44660360 44669050 ECH
Gso20g1445 20 44660360 44669050 Gso10g1909 10 46045430 46053918 GST