Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1413 ATGGGAATTTCTTCACAGACTTCTCTTGTTTCCTTCTCTTTGAAAGATCTGATTCAGGGAACTGAAGAAAACAAAACTTCTTCATCATATGGGTGTTTGTGGAGCAAAGTCTTGACAGCACAAGCCAAGAAGGTGAAAGGCACAAAGAGAAGTGTTAGGAGGCCAAGGAGGATTTTGATGATGAATAGAAGGAGTGGCTCTAGAAGAGGATCCTACAATGGGATTAGAAGACGTGTGAGAACATTGAAGAGCCTTGTGCCAAATAGTGACTCTTTGGGGTTGGATGGACTCTTCAGACAAACTGCTGATTACATATTGTCTCTACAAACGAGAGTGAGAGTCATGCAGGTTATGGTTAAGGTATTGACAGGTTCGGACGAGTGA 384 0.4245 MGISSQTSLVSFSLKDLIQGTEENKTSSSYGCLWSKVLTAQAKKVKGTKRSVRRPRRILMMNRRSGSRRGSYNGIRRRVRTLKSLVPNSDSLGLDGLFRQTADYILSLQTRVRVMQVMVKVLTGSDE* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1413 127 PANTHER TRANSCRIPTION FACTOR UPBEAT1 3 124 - -
Gso20g1413 127 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 124 IPR044660 GO:0006355
Gso20g1413 127 CDD bHLH_AtIBH1_like 63 119 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1413 Gso-Chr20 44322521 44323191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1413 56 126 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 56.757 9.75e-20 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1413 - - gmx:100794627 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1413 20 44322521 44323191 Gso10g1945 10 46402106 46402875 GST