Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1379 ATGCATTCCCATATTGAGAGAATTCTATGGAGCGAGGACCAAATTTCTCGCCGTGTTTTCGAGCTCGCCGCCGAAATCTCTGACGACTTCGGCGGCCATTCTCCGGCGCCCGTGGTCGTCGGCGTGGCCACTGGCGCGTTCCTCTTCTTGGCTGACCTTGTTCGCAAAATAGATCTCTCCATCGCCGTTGATTTCGTCCGAGTCGAATCCTACAGTTCCGGAACCGTGTCCAATGGCGCACCCACCATTTCCTTCGATTTGAAGGTCGACGTCAACTCCCGCCATGTCATCGTGGTCGAAGACATTGTAGATACTGGACATACCTTATCTAAAGTCATTGAGCACTTGAAATCAAAAGGAGCGTCCTCTGTTTCTGTTTGCACTTTCCTTGATAAACCTGCAAGGAGAAAAGTTCATTTTCAGCTGGTGGGTGAAGGGAAATACTACCGGGGATTCGAGTGTCCCAACTATTTCGTTGTAGGTTATGGACTGGATTTCGCCGAACTGTATAGAAATTTACCTTACATTGGTGTCTTGAAGCCTGAACTTTACAAGTGA 558 0.4875 MHSHIERILWSEDQISRRVFELAAEISDDFGGHSPAPVVVGVATGAFLFLADLVRKIDLSIAVDFVRVESYSSGTVSNGAPTISFDLKVDVNSRHVIVVEDIVDTGHTLSKVIEHLKSKGASSVSVCTFLDKPARRKVHFQLVGEGKYYRGFECPNYFVVGYGLDFAELYRNLPYIGVLKPELYK* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1379 185 Gene3D - 1 185 IPR029057 -
Gso20g1379 185 CDD PRTases_typeI 21 137 IPR000836 -
Gso20g1379 185 PANTHER HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE 2 185 - -
Gso20g1379 185 SUPERFAMILY PRTase-like 1 185 IPR029057 -
Gso20g1379 185 Pfam Phosphoribosyl transferase domain 15 166 IPR000836 -
Gso20g1379 185 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 2 185 - -
Gso20g1379 185 TIGRFAM HGPRTase: hypoxanthine phosphoribosyltransferase 8 180 IPR005904 GO:0004422|GO:0006166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1379 Gso-Chr20 43962040 43963898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1379 1 184 PRT Gene Family AT1G71750 63.077 1.35e-87 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1379 K00760 - gmx:100037484 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1379 20 43962040 43963898 Gso10g1973 10 46717478 46729549 GST