Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1369 ATGAACCGCGTCCTCCACGAGAGTGTAATAACTGGAGGTGCTGCGGGTGTTGTTGTAGAAACAGCTTTATACCCCATTGATACCATCAAAACTCGACTTCAGGTTGCTCGTGACGGAGGAAAGATTGTTTTGAAGGGTCTGTACTCTGGGTTGGCTGGAAATCTTGTTGGTGTCTTACCAGCTTCGGCAATTTTTATTGGTGTGTATGAACCCGCAAAGCAGCAATTGCTAAAGTCATTGCCTGAAAATATCAGTGCTGTGGCTCATTTTGCTGCAGGTGCTATTGGAGGCGTTGCTTCTTCTGTTGTTCGTGTTCCAACTGAGGTTGTTAAGCAAAGGATGCAGATTGGGCCATTTAGATCAGCCCCGGATGCTGTCCGTCTTATTGTCGCTAATGAGGGTTTTAATGGCCTTTTTGCGGGATATGGATCTTTCTTATTGCGAGATTTACCATTTGATGCTATAGAATTATGCATTTATGAGCAGCTCCGTATTGGGTATAAATTAGCGGCAAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTGGTGCCGTAACTGGAGCAGTTACAACTTCTCTTGATGTAATAAAAACCAGATTGATGGTAAAGCGATCTAAAACGGAACTCCTGATTATTTTTAAAGGCATCAGTGATTGTGTGAGGACAATAGTTAGAGAAGAAGGAAGTCATTCTCTTTTTAAGGGTATTGGGCCTAGAGTTTTGTGGATAGGAGTTAGAGGTTCAATATTCTTTTGTGTTCTTGAGAAGACAAAGCAAATTCTTGCTCAGAGGCGGCACTCCAAAGCTGCTGATGATGATGTTGCAATGCACACTTAA 852 0.4296 MNRVLHESVITGGAAGVVVETALYPIDTIKTRLQVARDGGKIVLKGLYSGLAGNLVGVLPASAIFIGVYEPAKQQLLKSLPENISAVAHFAAGAIGGVASSVVRVPTEVVKQRMQIGPFRSAPDAVRLIVANEGFNGLFAGYGSFLLRDLPFDAIELCIYEQLRIGYKLAAKRDPNDPENAMLGAVAGAVTGAVTTSLDVIKTRLMVKRSKTELLIIFKGISDCVRTIVREEGSHSLFKGIGPRVLWIGVRGSIFFCVLEKTKQILAQRRHSKAADDDVAMHT* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1369 283 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 3 274 - -
Gso20g1369 283 ProSiteProfiles Solute carrier (Solcar) repeat profile. 84 166 IPR018108 -
Gso20g1369 283 SUPERFAMILY Mitochondrial carrier 8 260 IPR023395 -
Gso20g1369 283 ProSiteProfiles Solute carrier (Solcar) repeat profile. 179 265 IPR018108 -
Gso20g1369 283 ProSiteProfiles Solute carrier (Solcar) repeat profile. 3 75 IPR018108 -
Gso20g1369 283 Pfam Mitochondrial carrier protein 83 164 IPR018108 -
Gso20g1369 283 Pfam Mitochondrial carrier protein 179 268 IPR018108 -
Gso20g1369 283 Pfam Mitochondrial carrier protein 7 78 IPR018108 -
Gso20g1369 283 Gene3D Mitochondrial carrier domain 7 282 IPR023395 -
Gso20g1369 283 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 3 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1369 Gso-Chr20 43853207 43865750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1369 7 276 EF-hand Containing Proteins AT2G35800 30.142 1.42e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1369 K15111 - gmx:100800051 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1369 20 43853207 43865750 Gso10g1982 10 46811566 46818788 GST