Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1361 ATGGCTTCTATTTCTTGTATGAGTGCTATTTTAAGCTTTCTTCTCATCTCTATCTTTCTTTCTGTTTACAATATTAAAGTGTGTGAGGCACAAGCCAGGCCTCCTACAGCGAAGGGGCTATCATACACCTTCTACGACAAAAGCTGTCCTAAGCTTAAATCTATCGTTAGATCAGAGCTCAAAAAGGTCTTCAATAAGGACATTGCTCAAGCTGCTGGCTTGCTTCGCCTTCACTTCCATGACTGCTTTGTTCAGGGTTGTGATGGATCAGTATTATTGGATGGATCAGCAAGTGGGCCGGGTGAGAAAGAAGCGCCACCAAACTTGACTTTGAGACCTGAGGCATTTAAGATCATCGAAAACCTTCGTGGTCTTTTAGAAAAGAGTTGTGGAAGAGTCGTCTCCTGCTCCGACATCACTGCTCTCACTGCACGTGATGCTGTTTTCCTTTCAGGAGGACCAGACTATGAGATTCCTTTGGGAAGAAGAGATGGGCTAACCTTTGCCACAAGACAAGTGACATTGGACAACCTTCCACCACCCTCAAGCAACGCTTCAACCATCCTAAGCTCCCTCGCCACCAAAAACCTCGACCCCACCGACGTCGTAGCGCTCTCAGGCGGCCACACCATAGGCATCAGCCACTGCAGCTCCTTCACCAACAGGCTCTACCCCACACAAGACCCCGTCATGGACAAGACCTTCGGCAACAACCTCAGACGCACGTGCCCCGCCGCCAACACCGACAACACCACTGTGCTTGACATCCGATCCCCCAACACCTTCGACAACAAGTACTACGTTGACCTCCTGAACCGCCAGGGCCTCTTCACCTCCGACCAAGACTTGTACACTGATAAAAGGACTAAGGGCATTGTCACCGACTTTGCCGTCAACCAGAACCTCTTCTTTGAGAAGTTTGTGTTCGCTATGCTCAAGATGGGTCAGCTTAATGTGCTCACCGGGAAACAAGGGGAGATTCGTGCCAATTGCTCCGTTAGAAATGCCAATAACAAGTCCCTCTTGACTTCTGTGGTGGAAGATGTGGTGGAAACTTTGATAGAAATGTAA 1071 0.4883 MASISCMSAILSFLLISIFLSVYNIKVCEAQARPPTAKGLSYTFYDKSCPKLKSIVRSELKKVFNKDIAQAAGLLRLHFHDCFVQGCDGSVLLDGSASGPGEKEAPPNLTLRPEAFKIIENLRGLLEKSCGRVVSCSDITALTARDAVFLSGGPDYEIPLGRRDGLTFATRQVTLDNLPPPSSNASTILSSLATKNLDPTDVVALSGGHTIGISHCSSFTNRLYPTQDPVMDKTFGNNLRRTCPAANTDNTTVLDIRSPNTFDNKYYVDLLNRQGLFTSDQDLYTDKRTKGIVTDFAVNQNLFFEKFVFAMLKMGQLNVLTGKQGEIRANCSVRNANNKSLLTSVVEDVVETLIEM* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1361 356 PANTHER PEROXIDASE 25-RELATED 27 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 SUPERFAMILY Heme-dependent peroxidases 35 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 CDD secretory_peroxidase 39 333 IPR033905 GO:0004601|GO:0042744
Gso20g1361 356 Pfam Peroxidase 56 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 ProSiteProfiles Plant heme peroxidase family profile. 39 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 Gene3D Peroxidase, domain 2 180 315 - -
Gso20g1361 356 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Gso20g1361 356 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Gso20g1361 356 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1361 356 PANTHER PEROXIDASE 27 338 - -
Gso20g1361 356 Gene3D - 43 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1361 Gso-Chr20 43750713 43753132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1361 10 356 Peroxidase AT1G71695 62.216 9.82e-166 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1361 K00430 - gmx:100775837 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1361 20 43750713 43753132 Gso10g1991 10 46910320 46912188 GST