Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1357 ATGAATGCTTCAGCATTATGTTCTCTGATGCTCACCCTTTGCTTGATCCTAATTTCTTATTCTCTTTTGCTAGCAAATGCTAAAGCCAATGGTGATCATTGCCTACTTGGAAATAGTCAGCAGATGATTGACCAAATTTGCAACCAAACCTCACAGAATGAAAACGAGTGCCTTAAGATTTTAAAAGCAGATCCTAAAATCGTGCAAGCAAAAGACTATTTTGAAATTTCAAAGGCGATCCTAAAGTTGGCCACGAAGAAGGCAAAAGAAGGACAGCACTTCCTCAAAGGGTTGGCACATAAAACCGGTTCTGCAGCCATTGCTTTGTGTGCAAACCAATGGTATCCTTACACGGTTGGATCGTTCGGGAGTGCCCTAGGTGAGTTGAAAGAAAGTCCTGATACTGCTAATTATGATGCAAAAGTTGCTGGTGATGGACCTGTATACTGTGATGAAGCCATTGCCAAAGCACATATTGTTAACCCTGCCATTTCTGCTCTTAACCACAAAACTTCGTTGCTTAGCTTTATTGCATTCCTAGCCACAAATTGTCTTTCAGAAGAGTAA 567 0.4092 MNASALCSLMLTLCLILISYSLLLANAKANGDHCLLGNSQQMIDQICNQTSQNENECLKILKADPKIVQAKDYFEISKAILKLATKKAKEGQHFLKGLAHKTGSAAIALCANQWYPYTVGSFGSALGELKESPDTANYDAKVAGDGPVYCDEAIAKAHIVNPAISALNHKTSLLSFIAFLATNCLSEE* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1357 188 SMART PMEI_2 38 181 IPR006501 GO:0004857
Gso20g1357 188 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 183 IPR006501 GO:0004857
Gso20g1357 188 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 1 185 - -
Gso20g1357 188 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 185 IPR035513 -
Gso20g1357 188 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 185 IPR035513 -
Gso20g1357 188 CDD PMEI-Pla_a_1_like 47 183 IPR034088 -
Gso20g1357 188 Pfam Plant invertase/pectin methylesterase inhibitor 42 169 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1357 Gso-Chr20 43713233 43713956 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1357 - - gmx:100802772 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1357 20 43713233 43713956 Gso10g1996 10 46945136 46945790 GST
Gso16g1318 16 32579668 32580558 Gso20g1357 20 43713233 43713956 PCT
Gso2g0658 2 6796841 6797647 Gso20g1357 20 43713233 43713956 PCT