Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1352 ATGCACTTCCCCATTCTCTTTCTCTTTCTCCTACCTTCACTCTTCAAGCTTTCGCATTCAACCACAATACTAGTAGATGGATCTTCCGAGTGGAAGAGCCCCACAGTTTCCATCGGTGACTCCATCATTTTCAAGCACAAGCAACACTACAACCTCTACATTTTCAAGAACGAGAAAGCCTTCAAGCTCTGTAACATCACTCAAGCCACTCTTCTCAGCAACCCCTACACATGGCATCCATCTCGGCCTGGTTTTTTCTACTTTACCTTCCACAATGGGTCACTCAAGGCATGCCAAGATTCTCAAAAGCTAGCCATAGAGGTAGCTTCTTCAGCAATGGCTCCAGAACATTCTCCAGTGGCAACACCAGCTCCTTCTTCTGGTGGAGAGGTGCCATCTTCTCCTTCGTTTCCGTGGCCTTTTCGTCCTGGACAAGAAGCTTCTTCACCTGGTCCTGCACCACAAGCACAAGCACAAGCAGGTTCGCCAGTGACAATTCCGTTAGTGCCGGATAAAGGTGGTGGCATGCCCTTCATTAACAGCAACCCTGCAGTTCCTCTTCCTACTGGTGAAGTTGATTCTGCTACCATACGCCCCTTACCCATCACTTCTGGCCATCAAGAACAGGTGATGATTGGGTCATTTGGACTTCATATTGCATTACACACCATGGCTTTACTGCTGCTATGA 690 0.4797 MHFPILFLFLLPSLFKLSHSTTILVDGSSEWKSPTVSIGDSIIFKHKQHYNLYIFKNEKAFKLCNITQATLLSNPYTWHPSRPGFFYFTFHNGSLKACQDSQKLAIEVASSAMAPEHSPVATPAPSSGGEVPSSPSFPWPFRPGQEASSPGPAPQAQAQAGSPVTIPLVPDKGGGMPFINSNPAVPLPTGEVDSATIRPLPITSGHQEQVMIGSFGLHIALHTMALLLL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1352 229 MobiDBLite consensus disorder prediction 115 161 - -
Gso20g1352 229 PANTHER OS04G0422700 PROTEIN 2 228 - -
Gso20g1352 229 SUPERFAMILY Cupredoxins 20 108 IPR008972 -
Gso20g1352 229 Gene3D - 19 111 IPR008972 -
Gso20g1352 229 PANTHER OS04G0422700 PROTEIN 2 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1352 Gso-Chr20 43653945 43655976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1352 8 126 Phytocyanin Superfamily AT2G25060 28.676 1.27e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1352 - - gmx:100800621 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1352 20 43653945 43655976 Gso10g2002 10 47004248 47006605 GST
Gso16g1330 16 32727457 32730088 Gso20g1352 20 43653945 43655976 PCT
Gso20g1352 20 43653945 43655976 Gso16g1330 16 32727457 32730088 PCT