Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1351 ATGGCGACTTCGAATTCACGAAAATCAGAAACCTCCCCTTCCCCTTCTCCCACCACCAACTTCATCCCCATCCCCGCCGCCCCCGTCCCTAAAACCGTCGATGACGTGTGGCGGGAGATCGTGGCCGGCGACCGCCGTGAGTGCAAGGAGGAGGCCCCCGACGACGACTACGACAAGGAGATGATGACCCTCGAGGACTTCCTCGCCAAGGCCGACCAAGACCAAGAACCCGACTACGACAACAACAACATCAAGATGCCAATGCCACTCACCGAGAGGCTCGGCAGCGGCACCCTCTTCTCCTTCGACCACCTTCCCACGACGCCGTTTCACGACTCCGCCGCCGCAGAAGGCTCCGTCATAGGCTTCGGAAACGGCGTCGAGGTCGTCGAAGGGGGGAGGGTTAAAAGACGGCGTCCCGTTTTGGAGCAGTTGGATAAGGCCGCGCAGCAGAGACAGAGGAGGATGATAAAAAACAGAGAATCTGCTGCTAGGTCCAGGGAACGCAAGCAGGCATACCAAGTGGAATTGGAGTCCTTGGCGGTGAAACTAGAGGAGGAAAATGACAAGCTCTTGAAGGAAAAGGCTGAGAGGAAAAAGGAGAGGTACAAGCAGCTAATGGAAAAAGTACTCCCTATCGCGCAGAAGCAAAAGCCACCATGTATACTCCGTAGGGCTCGCTCCTTGCAATGGTAG 696 0.5661 MATSNSRKSETSPSPSPTTNFIPIPAAPVPKTVDDVWREIVAGDRRECKEEAPDDDYDKEMMTLEDFLAKADQDQEPDYDNNNIKMPMPLTERLGSGTLFSFDHLPTTPFHDSAAAEGSVIGFGNGVEVVEGGRVKRRRPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERKKERYKQLMEKVLPIAQKQKPPCILRRARSLQW* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1351 231 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 26 230 - -
Gso20g1351 231 PRINTS cAMP response element binding (CREB) protein signature 1 16 - -
Gso20g1351 231 PRINTS cAMP response element binding (CREB) protein signature 146 162 - -
Gso20g1351 231 PRINTS cAMP response element binding (CREB) protein signature 164 184 - -
Gso20g1351 231 PRINTS cAMP response element binding (CREB) protein signature 184 201 - -
Gso20g1351 231 CDD bZIP_plant_BZIP46 151 197 - -
Gso20g1351 231 Gene3D - 149 197 - -
Gso20g1351 231 Pfam bZIP transcription factor 149 208 IPR004827 GO:0003700|GO:0006355
Gso20g1351 231 Coils Coil 170 209 - -
Gso20g1351 231 MobiDBLite consensus disorder prediction 1 28 - -
Gso20g1351 231 SMART brlzneu 147 209 IPR004827 GO:0003700|GO:0006355
Gso20g1351 231 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 149 201 IPR004827 GO:0003700|GO:0006355
Gso20g1351 231 MobiDBLite consensus disorder prediction 1 17 - -
Gso20g1351 231 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 154 169 IPR004827 GO:0003700|GO:0006355
Gso20g1351 231 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 230 IPR043452 GO:0003700|GO:0045893
Gso20g1351 231 SUPERFAMILY Leucine zipper domain 151 202 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1351 Gso-Chr20 43646478 43649458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1351 31 231 bZIP Transcription Factor Family AT5G44080 52.857 1.68e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso20g1351 bZIP_1 9.8e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1351 K14432 - gmx:102659969 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1351 20 43646478 43649458 Gso10g2003 10 47009443 47012720 GST