Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1335 ATGGCATCAGATCACTCGTCCGTCAACCAACCCAAATTTGTCTATCCAAACAATGAACTTGAGCAACAAGAAGCCCTAGAGGTCGAAACCAAGGACTTTGACTACTCAAAGAGATCTCAATGGCTACGTGCTGCTGTTTTAGGTGCCAATGACGGGTTGGTCTCAACAGCATCACTAATGATGGGTGTGGGAGCAGTGAAGCAAGACATCAAAGTCATGATCCTAACAGGTTTTGCAGGGCTAGTTGCTGGGGCATGCAGCATGGCCATTGGGGAGTTTGTGTCGGTTTACTCGCAGCTGGACATAGAAGTTGCTCAAATGAAAAGAGAGAAAGAAAGGGACAACATAGATCAAGAGGAAGATGGTTATGAGAAAGAGAAATTGCCAAACCCTATACATGCTGCAGCAGCATCAGCTCTTGCATTTTCAGTTGGTGCATTGGTGCCTCTCCTTGCAGCCTCTTTTATAAGGGACTATAAGGTGAGGCTTGGTGTGATTTTGGGAGCAGTGAGTTTAGCTCTTGTGGTGTTTGGTTGGTTGGGGGCAGTGTTGGGTAAGGCTCCAACATTTAGGTCTTGTGTGAGAGTCTTGCTTGGGGGGTGGCTAGCCATGGCTATTACTTTTGGGCTAACCAAGTTGATTGGGTCAAGTGGTCTTTAG 660 0.4682 MASDHSSVNQPKFVYPNNELEQQEALEVETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERDNIDQEEDGYEKEKLPNPIHAAAASALAFSVGALVPLLAASFIRDYKVRLGVILGAVSLALVVFGWLGAVLGKAPTFRSCVRVLLGGWLAMAITFGLTKLIGSSGL* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1335 219 Pfam VIT family 120 211 IPR008217 GO:0005384|GO:0030026
Gso20g1335 219 Pfam VIT family 42 118 IPR008217 GO:0005384|GO:0030026
Gso20g1335 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 14 216 IPR008217 GO:0005384|GO:0030026
Gso20g1335 219 CDD Nodulin-21 40 188 - -
Gso20g1335 219 Coils Coil 102 122 - -
Gso20g1335 219 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 14 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1335 Gso-Chr20 43448404 43449442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1335 17 219 Nodulin-like Gene Family AT3G43660 71.921 5.11e-102 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1335 K22736 - gmx:100814343 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1335 20 43448404 43449442 Gso10g2020 10 47186962 47187928 GST
Gso16g1351 16 33020204 33021268 Gso20g1335 20 43448404 43449442 PCT
Gso2g0677 2 7088798 7090044 Gso20g1335 20 43448404 43449442 PCT
Gso20g1335 20 43448404 43449442 Gso16g1351 16 33020204 33021268 PCT
Gso20g1335 20 43448404 43449442 Gso2g0677 2 7088798 7090044 PCT