Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1328 ATGCCAACAAGGTTGTCACTTTCGGATATTAAGTCTGCTACAATGGGGTTCAATCGAGATAGGCTTGTTGGGGAGGGTGCATCTGCCAAGGTTTATAAAGGGTTTCTTCCTTTTCGAGGGGATGTGGCTGTGAAGAGATTTGAAAGAGAGAATGATTTGGATTGTTTGCACAACCCTTTTGCTACTGAATTTGCCACCATAGTGAGTTACTTGCGGCACAAGAATTTGGTTCAGCTTAAGGGGTGGTGCTGTGAGGGGAATGAGTTGGTTCTGGTTTATGAGTTTCTTCCCAATGGGAGCCTCAATAAGGTTTTGCATAGAAACTTCAATTCTTCCGTTGTTCTTTCGTGGCAGCAAAGGGTGAACATTGTTCTCGGGGTTGCTTCAGCTCTTACCTACCTTCATGAGGAGTGTGAGAGGCAGATCATTCATAGGGATGTGAAGGCATGA 450 0.4489 MPTRLSLSDIKSATMGFNRDRLVGEGASAKVYKGFLPFRGDVAVKRFERENDLDCLHNPFATEFATIVSYLRHKNLVQLKGWCCEGNELVLVYEFLPNGSLNKVLHRNFNSSVVLSWQQRVNIVLGVASALTYLHEECERQIIHRDVKA* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1328 149 PANTHER - 1 149 - -
Gso20g1328 149 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Gso20g1328 149 ProSitePatterns Protein kinases ATP-binding region signature. 23 45 IPR017441 GO:0005524
Gso20g1328 149 SUPERFAMILY Protein kinase-like (PK-like) 4 149 IPR011009 -
Gso20g1328 149 Gene3D Transferase(Phosphotransferase) domain 1 96 149 - -
Gso20g1328 149 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 1 149 - -
Gso20g1328 149 ProSiteProfiles Protein kinase domain profile. 17 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g1328 149 Pfam Protein kinase domain 18 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1328 Gso-Chr20 43336913 43337489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1328 1 149 Receptor kinase-like Gene Family AT5G42120 65.584 1.12e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso20g1328 Pkinase 5.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1328 - - gsj:114402134 305.064