Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1314 ATGGAAGACCCCTCAGAATCCCCACCACCCCTTAAAACCTACAAACTAACAGCCACATCAATCTCCTACACCAAATCCACCACCACCAAACCCTCATTCTCTTCACTTTTCTTCACCCCATGCACCAACACCCCACCAACCTACATCCTCAAAGACATCTCCCTGACCGCCCTCCCCTCCCAAATCCTGGCCGTGGTGGGCCCCAGCGGCGCCGGAAAATCCACCCTCCTCGACATCCTCGCCGCCCGCACCCTCCCCTCCCACGGCACCCTCCTCCTCAACTCCGCCCCTCTCGTCCCCTCCACCTTCCGCAAGCTCTCCTCCTATGTCCCCCAACACGACCACTGCCTCCCCCTCCTCACCGTCTCCGAAACCTTCCTCTTCGCCGCAAAGCTCCTCAAACCCAAAACCTCCAACCTCGCCGCCACCGTCTCCTCCCTCCTCTCCGAACTCCGACTCACGCACCTTTCCAACACTCGCCTCGCGCATGGCCTCTCCGGCGGAGAACGCAGAAGGGTCTCCATTGGCCTCAGCCTCCTCCACGATCCCGCGGTGCTACTCCTCGACGAACCCACTTCGGGGCTCGACAGCACTTCAGCCTTCAAAGTAATGCGAATTCTAAAGCAAACGTGCACCACTCGCAACAGAACCATCATTCTCTCCATTCACCAACCCAGCTTCAAGATCCTCGCTTGCATTGATAGGATCTTGCTGCTCTCCAAAGGAACCGTGGTTCATCATGGTAGCGTTGCCACCTTGCACGCGTTCTTGCACTCCAGTGGCTTCACTGTTCCTCACCAACTCAACGCGCTGGAATATGCTATGGAGATTTTGAGCCAGTTGAATGAGGTGAAGCCTGTTACTCCCCCGAGTATTCCTGAATCGCCTCAAAGTTCAATTTCAACGAGTTCCGTTTCTGAGGGTGGAGCTAGGAGTAGTAGAGAGATCATCAGGTATAGAAGCTCTAGGGTTCATGAGATTTTCACTCTTTATAGCAGGTTTTGGAAGATTATCTACAGAACTAGACAACTTCTTTTGACCAACACAGCTGAAGCACTTCTCGTGGGGCTTGTGTTGGGAACTATTTATATCAATATAGGGTTTGATAAAGAAGGGATTGAGAAAAGGTTTGGTCTCTTTGCCTTCACTCTCACGTTTCTCTTATCCTCCACAACTGAAACCCTTCCTATTTTCATCAACGAGAGACCGATCTTGTTGAGAGAAACTTCGAGTGGGGTTTATAGGCTTTCGTCTTATCTCATTGCAAACACGCTTGTTTTCTTGCCCTACTTGTTCGTTATTGCTGTTATATATTCTATTCCAGTTTATTTCTTGGTGGGTCTTTGTGCTTCGTGGCTTTCTTTTGCTTACTTTGTTTTGGTCATTTGGGTCATTGTTCTCATGGCAAACTCGTTCGCTCTCTTCTTGAGCTCTCTTGCACCGAACTACATTGCTGGGACTTCGCTCCTAACGGTGCTTCTCGCAGCGTTTTTTCTCTTCTCTGGGTATTTTATCTCCAAGGAAAGCTTGCCCAAGTACTGGCTCTTCATGCATTTCTTCTCTATGTATAAATACGCTCTTGATGCCCTTCTCATCAACGAGTACTCGTGTTTGGTGTCACGGTGTTTGATATGGTACCAAGAGAATGAACAGTGCATGGTGACTGGTGGTGACGTGTTGCAGAAGAGAGGGCTCAAGGAGAGTGAAAGGTGGACCAACGTGTACTTCTTGCTCGGGTTCTTTCTGCTGTATCGTGTGCTTTGCTTCTTGGTTTTGGCTAGAAGGGTTTCAAGATCGAAAACTTAA 1806 0.5 MEDPSESPPPLKTYKLTATSISYTKSTTTKPSFSSLFFTPCTNTPPTYILKDISLTALPSQILAVVGPSGAGKSTLLDILAARTLPSHGTLLLNSAPLVPSTFRKLSSYVPQHDHCLPLLTVSETFLFAAKLLKPKTSNLAATVSSLLSELRLTHLSNTRLAHGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMRILKQTCTTRNRTIILSIHQPSFKILACIDRILLLSKGTVVHHGSVATLHAFLHSSGFTVPHQLNALEYAMEILSQLNEVKPVTPPSIPESPQSSISTSSVSEGGARSSREIIRYRSSRVHEIFTLYSRFWKIIYRTRQLLLTNTAEALLVGLVLGTIYINIGFDKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLIANTLVFLPYLFVIAVIYSIPVYFLVGLCASWLSFAYFVLVIWVIVLMANSFALFLSSLAPNYIAGTSLLTVLLAAFFLFSGYFISKESLPKYWLFMHFFSMYKYALDALLINEYSCLVSRCLIWYQENEQCMVTGGDVLQKRGLKESERWTNVYFLLGFFLLYRVLCFLVLARRVSRSKT* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1314 601 MobiDBLite consensus disorder prediction 288 307 - -
Gso20g1314 601 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 5 596 - -
Gso20g1314 601 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 596 - -
Gso20g1314 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 257 IPR027417 -
Gso20g1314 601 SMART AAA_5 59 243 IPR003593 -
Gso20g1314 601 Pfam ABC transporter 50 193 IPR003439 GO:0005524
Gso20g1314 601 Pfam ABC-2 type transporter 326 535 IPR013525 GO:0016020|GO:0140359
Gso20g1314 601 ProSitePatterns ABC transporters family signature. 165 179 IPR017871 GO:0005524
Gso20g1314 601 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 266 IPR003439 GO:0005524
Gso20g1314 601 Pfam ABC-2 type transporter 223 283 IPR043926 GO:0140359
Gso20g1314 601 Gene3D - 33 285 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1314 Gso-Chr20 43163893 43166002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1314 45 322 Calmodulin-binding Proteins AT2G36910 27.431 6.84e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1314 K05681 - gmx:100790712 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1314 20 43163893 43166002 Gso10g2053 10 47552208 47554349 GST