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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gso20g1291
ATGGGTAGCATCGTGGAAGACGCCGACACAGACACGGTGTATGTGGCGGTCGGAAAGAACGCCGAGAAGACGCAGCAACTGTTGCATTGGACGGTTAAGAATTTCTCCGGCAAAGAAATCTGCCTTCTTCATATTCACCAACCTCACTCTCTCAATTCATTCTCTGACAGAAATCTCTCTGGGTATGAACCAAAAGACCATGCGATCAAAGCATTCCAGGAGCATGGAAATCAAAAAGTGCATGAACTTCTAGACCAATACATTCTCACTCTGGTCCCAGCAGGGGTACGAGCCTACAAATTGTTGATTGAGATGGATGATATTGAGAAAGGAATCACAAAAGCTATTGCTCAACACAATATTAGATGGCTTGTAATGGGAGCAGCAGCAGCAGACGGATATAACTTGGGCAAACTGGCTAAGCAAGAGTCGGAGAAAGCTATTTTTGTACGTGAACAAGCATTGCTATCCTGTAATACGTGGTTCATTTGCAAGGGTAACGTCATATGTAATAGGGAATATAGTAAGCATACTTCTGACATAGAGACTGGCCCTGCACTGCTGGTGCTCAATCAAAATACAGATGCCAAGCAATCAGAAAAGATCAAATCAGAATCGATTCCTGATGATGCATTGAAATATTTTGATTTTGATGATATGAAAGAGATAAAAAGTGTCCATTCCCACCATTCCTTAAATTCAAAATGGCCGTTTAATAATGTCATGCACAGGTCAAAATTGGCAGATATGATGTTTCATGAGGATGAAGAATTTGAAAGCCAGTGTGCTAAGGAGATCCAAAGAAGAAAAGAAGTTGAAGAACAATTGGCAAGGGAAAAGCAAGAAGTACAGAAAATGAAGAATCAGCGAGATGAAATACTTGAAGAATTGCAAATGGTCCAAGACCAAAATTCAGCACTTATGAACCAAATTTCTGAGTCCCAGTGTACGGAAACAGAGTTGGAGGAGAAGATCATATCAGCTGTGGACCTCTTGATAAGTTTCAGGGAACAGAGAGATAGGCTTAGGATAGAGCATGCAAATGCACTTAGGGAAGTAAAAGTGCTGAGAAGATTTGGGGAAGCAGGTACTTCCTCTTATCGGGTAGAATTCCCTGCATTTTCTTTTGTGGAGATCAATGAGGCAACTAATGATTTCGATCCATCTTGGAAGATTGGAGAGGGAAGGTATGGAAGTGTTTACAAGGGACTGCTTCGCAACATGCATGTTGCCATAAAAATGTTACCCTCTTATGGTCATCAGAGTGTATTAGAGTTCCAACATCAGGTAGAGGTCTTGAGTAGGGTAAGACATCCAAACCTGTTAACACTAATGGGAAGCTGTGCAGAGTCTAGGTCTCTTGTGTATGAGTACATAAACAATGGCAGCCTCGAAAGCCATCTAGCCCACAAAGAAAAGAATCCACTTCCATGGCAAATTCGAATATCCATTGCTACTGACATATGCTCTGCTCTAATCTTCCTTCACTCTAGTGAGCCTTGTATTATCCATGGGAATTTGAAACCTAGTAAGGTTCTCCTTGATGCCAACTTTGTTGCCAAACTCAGTGACTTGGGCATTCCCAGTTTAGTCCAGCAAAGTTTGGATTCAGCTGACACAAGCACAATATGTAATAACCCAAATGAAAGTTTGGCTTATGTGGATCCAGAGTATTTTGTCACTGGCAAGCTTACACCAGAATCGGATGTATATTCTTTTGGAGTCATATTGTTACAACTTCTAACTGGAAGACCCCTTTTGGGGCTAGTTAGAGATATGAAATGTGCATTGGAAAAGGAAAATTTTAAAGCAATCTTGGACTTTTCATCTGGTGAATGGCCGCTTTTTCAAACCGAACAGCTGGCATATTTAGCATTGAGGTGTTGTGAAAAGACTTGGTTGAACCGGCCAGACCTTGTGTCAGAAATCTGGAGTGTTCTTGAACCATTCAAAGCTACTTGCATTGACACGTCACCACATTTGATTTCTAAGAAGCTTCGTCGTGTTCCTTCCCATTTTGTGTGCCCCATTGTCCAGGAAGTAATGGAAGATCCATACATAGCTGCAGATGGCTTTACGTATGAAGAAGAGGCAATAAGAGGATGGTTGAATAGTGGCCACGACACTTCCCCCATGACAAACCTCAAATTAGATCACACAGATTTGGTACCTAACTATGCTCTACATAATGCAATTCTGGAGTGGCAGCAACAGTGA
2217
0.4168
MGSIVEDADTDTVYVAVGKNAEKTQQLLHWTVKNFSGKEICLLHIHQPHSLNSFSDRNLSGYEPKDHAIKAFQEHGNQKVHELLDQYILTLVPAGVRAYKLLIEMDDIEKGITKAIAQHNIRWLVMGAAAADGYNLGKLAKQESEKAIFVREQALLSCNTWFICKGNVICNREYSKHTSDIETGPALLVLNQNTDAKQSEKIKSESIPDDALKYFDFDDMKEIKSVHSHHSLNSKWPFNNVMHRSKLADMMFHEDEEFESQCAKEIQRRKEVEEQLAREKQEVQKMKNQRDEILEELQMVQDQNSALMNQISESQCTETELEEKIISAVDLLISFREQRDRLRIEHANALREVKVLRRFGEAGTSSYRVEFPAFSFVEINEATNDFDPSWKIGEGRYGSVYKGLLRNMHVAIKMLPSYGHQSVLEFQHQVEVLSRVRHPNLLTLMGSCAESRSLVYEYINNGSLESHLAHKEKNPLPWQIRISIATDICSALIFLHSSEPCIIHGNLKPSKVLLDANFVAKLSDLGIPSLVQQSLDSADTSTICNNPNESLAYVDPEYFVTGKLTPESDVYSFGVILLQLLTGRPLLGLVRDMKCALEKENFKAILDFSSGEWPLFQTEQLAYLALRCCEKTWLNRPDLVSEIWSVLEPFKATCIDTSPHLISKKLRRVPSHFVCPIVQEVMEDPYIAADGFTYEEEAIRGWLNSGHDTSPMTNLKLDHTDLVPNYALHNAILEWQQQ*
739
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gso20g1291
738
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
668
738
IPR013083
-
Gso20g1291
738
Pfam
U-box domain
669
737
IPR003613
GO:0004842|GO:0016567
Gso20g1291
738
CDD
RING-Ubox_WDSUB1_like
673
714
-
-
Gso20g1291
738
ProSiteProfiles
Protein kinase domain profile.
386
651
IPR000719
GO:0004672|GO:0005524|GO:0006468
Gso20g1291
738
Gene3D
HUPs
12
141
IPR014729
-
Gso20g1291
738
SUPERFAMILY
RING/U-box
665
738
-
-
Gso20g1291
738
SUPERFAMILY
Protein kinase-like (PK-like)
366
647
IPR011009
-
Gso20g1291
738
Coils
Coil
332
352
-
-
Gso20g1291
738
ProSiteProfiles
U-box domain profile.
668
738
IPR003613
GO:0004842|GO:0016567
Gso20g1291
738
ProSitePatterns
Protein kinases ATP-binding region signature.
392
413
IPR017441
GO:0005524
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gso20g1291
Gso-Chr20
42955593
42967945
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gso20g1291
11
737
U-box Gene Family
AT2G45910
41.583
0.0
582
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
PK
RLK-Pelle_RLCK-IXb
Gso20g1291
PK_Tyr_Ser-Thr
7.8e-37
CL0016
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gso20g1291
-
-
gmx:100787938
1475.3
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gso20g1291
20
42955593
42967945
Gso10g2086
10
47822019
47829366
GST
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