Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1287 ATGGCTCCCAAACCGCCTAGTACGGGTCTGTTTGTTGGACTGAACAAGGGTCACGTCGTCACCAAGAAGGAATTGCCTCCACGCCCCTCAGATCGTAAGGGGAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTAGCCGGTTTTGCACCCTATGAAAAGCGTATAACTGAGTTGCTGAAGGTTGGGAAGGATAAGAGGGCACTGAAGGTTGCAAAGAGAAAGCTCGGAACACACAAACGCGCAAAGAAGAAGCGTGAGGAAATGTCCAGTGTTCTCAGGAAGATGAGGGCTGGTGGTGCTGGAGACAAGAAGAAATAA 333 0.4985 MAPKPPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGAGDKKK* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1287 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Gso20g1287 110 MobiDBLite consensus disorder prediction 87 110 - -
Gso20g1287 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Gso20g1287 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
Gso20g1287 110 MobiDBLite consensus disorder prediction 1 37 - -
Gso20g1287 110 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
Gso20g1287 110 MobiDBLite consensus disorder prediction 79 110 - -
Gso20g1287 110 Gene3D 60S ribosomal protein L36 2 108 IPR038097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1287 Gso-Chr20 42937765 42939353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1287 7 110 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 85.577 1.86e-59 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1287 K02920 - gmx:100796037 220.32