Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1284 ATGATCAAGATGAATCTCGTTGCGGCGTTCGCATTCTTGTGTCTATTCACGGTGGAGCCATGGCGCGTTTGCTCGCAACAACAACAACAGAGGCTTCTCGTGAACATGACGCTCGTTCCAAGCGCTCGTGCTAGTGGCGCTCTTTGTTTGGACGGAAGTTTACCGGCGTATCACTTGCACAGAGGATTTGGAGCTGGTAAAGACAACTGGCTTCTACAATTTGAGGGAGGTGGATGGTGTAATGACTTGAAATCATGCTTGGATAGAGCCAAAACTCGGAGGGGTTCAACACGTTATATGACCAAGTGGGAGGTGTTCTCCGGTATTTTAAGCAATAATGCCACCCTTAATGCAGATTTTTACAATTGGAACCGTGTGAAGCTGAGATATTGTGATGGGGCTTCATTTACTGGAGATGCTGTGTTCACTAACAAGACAACAACTCTTCATTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTCGCGACCTTTTACCACTGGGTTTGGGAAAGGCACGGAAGGCTTTGCTTTCAGGTTGCTCAGCAGGAGGTTTAGCGACCTTTCACCATTGTGACAACTTCGCCAAGTATTTGCCAACGAATGCTAGTGTTAAATGCTTGAGTGATGCCGGTTTTTTTCTTGACGAAAGAGATATCAGTTTGAATCATACTATGAGGTATAATTTCAAAAGTCTAGTTCAATTGCAGGGGATAGAGAAGAACCTGAATGGAAATTGTACCAGAGCACTGTACTTTCCTGACTTGTGCTTCTTTCCACAATATGCGTTGAGATACATATCAACGCCATATTTTATTTTGAACTCTGCCTACGATGTATTCCAGTTCAGTCATATTTTGGTGCCACCCTCTGCTGATATGCACGGACACTGGAAACAATGCAAGGCGAACCTGGCGGAGTGTACAGCAGACCAAATTGATACACTGCAAGGTTTTAGGCTTGACATGCTTGGAGCTTTGAGACCGTTCTATATGAATTCAAGAAGAGGGGGGATGTTCATAAATTCATGTTTTGCTCATTGCCAGAGTGAACTACAAGAAACATGGTTTGGGGATGATTCTCCGAGAATAAACAATAAGACTATTGCAGAAGCGATTGGTGATTGGTATTTTAGTAGAAACATAAGCAAGGAAATAGATTGTGCATATCCTTGTGATGCAACTTGTCATAATCTTATACCGTAA 1203 0.4306 MIKMNLVAAFAFLCLFTVEPWRVCSQQQQQRLLVNMTLVPSARASGALCLDGSLPAYHLHRGFGAGKDNWLLQFEGGGWCNDLKSCLDRAKTRRGSTRYMTKWEVFSGILSNNATLNADFYNWNRVKLRYCDGASFTGDAVFTNKTTTLHFKGQKIWEAIIRDLLPLGLGKARKALLSGCSAGGLATFHHCDNFAKYLPTNASVKCLSDAGFFLDERDISLNHTMRYNFKSLVQLQGIEKNLNGNCTRALYFPDLCFFPQYALRYISTPYFILNSAYDVFQFSHILVPPSADMHGHWKQCKANLAECTADQIDTLQGFRLDMLGALRPFYMNSRRGGMFINSCFAHCQSELQETWFGDDSPRINNKTIAEAIGDWYFSRNISKEIDCAYPCDATCHNLIP* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1284 400 Pfam Pectinacetylesterase 27 380 IPR004963 GO:0016787
Gso20g1284 400 PANTHER PECTIN ACETYLESTERASE 9 26 400 - -
Gso20g1284 400 PANTHER NOTUM-RELATED 26 400 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1284 Gso-Chr20 42896642 42906305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1284 4 400 Carbohydrate Esterase AT5G23870 65.915 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1284 K19882 - gmx:100794453 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1284 20 42896642 42906305 Gso10g2094 10 47902528 47911365 GST