Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1282 ATGGAGTTTCTAGGGCTAGCTGGGGTTCTTGTTGCCTTCTTGGCAGCACTTTGCCTCTTCTTGCTCTTGATATTAACATTTTCTTGGTGGGTTTTCCCTAACCAAACACTTAAGAAGCTTAAGAAATGTGGGTTGGGAGGGCCAACCCCAAGTTTTCCCCTTGGAAACATTAAAGAGATGAAAAGAAAGAATAACATTCAATCTTCATCAGTTGTACAATCCTCAAATCTAACACATGATATACACTCTTACGTTTTTCCCTACTTCTCTAGCTGGCAGAAATCACATGGTAAGGTTTTCGTGTACTGGTTGGGGACGGAGCCATTTCTGTACGTTGCAGAGCCAGAGTTCTTGAAGAAAATGTCAACAGTGGTGATGGCCAAGAGTTGGGGAAAACCAAGTGTGTTTAGAACTGACAGAGACCCTATGTTTGGGAGTGGTTTGGTTATGGTTGAGGGCAACGATTGGGTTCGTCACAGGCACATTGTTGCTCCCGCATTCAATCCCATTAATTTGAAGGCCATGGCAAACATGATGGTTGAATCTACGAATCAAATGATTGAAAGATGGGCTACCCAAATAAACACCGGCAACCCCGAATTGGATGTGGAGAAGGAGATTATAGCAACAGCTGGAGAGATCATAGCAAGAACAAGCTTTGGCATGAAAGACGACAATGCTAGAGATGCCATTGCTAAATTACGAGCCTTGCAAATGACTCTCTTTAAGAGTAATCGGTATGTGGGTGTTCCCTTTGGCAAGTATTTCAATGTCAAGAAAACCTTGGAGGCCAAGAAACTTGGGAAAGAAATCGATGAGCTCTTGTTGTCCATCATTGAATCTCGGAAGAATTCACCGAAGAAAAATTCTCAACGAGATTTGTTAGGTTTGTTGCTTCAAGGAAACCATCAGGTTGATGGCCGGTCAGGAAAGACATTAACATCTCGAGAAGTGGTTGATGAATGCAAGACCTTCTTCTTCGGAGGCCATGAAACCACAGCACTTGCCATCACATGGACCTTGTTGCTTCTAGCCATGCATGAAGATTGGCAAAACCAGTTGAGAGATGAGATAAGAGAAGTGGTGGGGAACACCCTAGAACTTGATATTTCTATGCTTGCTGGTTTGAAAAAGATGAAATGGGTCATGAATGAAGTTCTAAGGCTATACCCACCAGCACCAAATGTGCAAAGGCAAGCAAGAGAAGACATTAAAGTTGATGATATAACAGTGCCTAATGGAACCAACTTGTGGATCGATGTGGTAGCTATGCACCATGACCCAGAAGTATGGGGAAAGGATGCAAATGAGTTCAAACCAGAAAGGTTCATGGATGATGTGAATGGTGGGTGTAACCACAAGATGGGGTACTTGCCTTTTGGGTTTGGAGGGAGAATGTGTGTAGGTAGGAATTTGACCTTTATGGAGTACAAAATTGTGTTAACCCTACTTCTCTCTAGATTTACTTTTAAGCTTTCACCAGGTTACAACCATTCACCTTCGATTATGCTCTCCCTAAGGCCAAGTCATGGACTTCCACTCATAGTTCAGCCCCTTTAG 1560 0.4301 MEFLGLAGVLVAFLAALCLFLLLILTFSWWVFPNQTLKKLKKCGLGGPTPSFPLGNIKEMKRKNNIQSSSVVQSSNLTHDIHSYVFPYFSSWQKSHGKVFVYWLGTEPFLYVAEPEFLKKMSTVVMAKSWGKPSVFRTDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKAMANMMVESTNQMIERWATQINTGNPELDVEKEIIATAGEIIARTSFGMKDDNARDAIAKLRALQMTLFKSNRYVGVPFGKYFNVKKTLEAKKLGKEIDELLLSIIESRKNSPKKNSQRDLLGLLLQGNHQVDGRSGKTLTSREVVDECKTFFFGGHETTALAITWTLLLLAMHEDWQNQLRDEIREVVGNTLELDISMLAGLKKMKWVMNEVLRLYPPAPNVQRQAREDIKVDDITVPNGTNLWIDVVAMHHDPEVWGKDANEFKPERFMDDVNGGCNHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSRFTFKLSPGYNHSPSIMLSLRPSHGLPLIVQPL* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1282 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Gso20g1282 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 514 - -
Gso20g1282 519 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1282 519 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1282 519 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1282 519 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1282 519 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 5 514 - -
Gso20g1282 519 Gene3D Cytochrome P450 29 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1282 519 Pfam Cytochrome P450 86 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1282 519 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1282 519 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1282 519 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1282 519 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1282 519 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1282 519 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1282 519 SUPERFAMILY Cytochrome P450 80 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1282 Gso-Chr20 42878151 42881487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1282 1 519 Cytochrome P450 AT5G52400 58.868 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1282 - - gmx:100785284 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1282 20 42878151 42881487 Gso10g2096 10 47939193 47942789 GST
Gso16g1505 16 35304253 35308049 Gso20g1282 20 42878151 42881487 PCT
Gso9g1132 9 32420185 32423962 Gso20g1282 20 42878151 42881487 PCT