Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1281 ATGGAGTTTTTTCTAGGGCTATGTGGGGTTCTTGTTGCCTTCTCAGCAGCACTTTGCCTCTTGTTGTTCTCGATACTAACATTGTATTGGTGGGTTTTCCCTAACCAAAAACTTAAGAAGCTTAAGAAATTTGGGTTGGGAGGTCCAACCCCAAGTTTTCCACTTGGAAATATTGGAAAGATGAAAAGAAAGAATAGCATTCAATCTTCAGTTGTATCCTCAAATCTCTCACACGATATACACTCTAATGTTTTCCCCTACTTTTCCAGCTGGCAGAAATCACATGGTAAGGTTTTCGTATACTGGTTGGGGACGGAGCCATTTTTGTACGTTGCAGAGCCAGAGTTCTTGAAGAAAATGTCAACGGTGGTGATGGCCAAGAGTTGGGGAAAACCAAGTGTGTTTAGAACTGACAGAGACCCTATGTTTGGGAGTGGTTTGGTTATGGTTGAGGGCAACGATTGGGTTCGTCACAGGCACATTGTTGCTCCCGCATTCAATCCCATTAATTTGAAGGCCATGGCAAACATGATGGTTGAATCTACGAATCAAATGATTGAAAGATGGGCTACCCAAATAAACACCGGCAACCCCGAATTGGATGTGGAGAAGGAGATTATAGCAACAGCTGGAGAGATCATAGCAAGAACAAGCTTTGGCATGAAAGACGACAATGCTAGAGATGCCATTGCTAAATTACGAGCCTTGCAAATGACTCTCTTTAAGAGTAATCGGTATGTGGGTGTTCCCTTTGGCAAGTATTTCAATGTCAAGAAAACCTTGGAGGCCAAGAAACTCGGGAAAGAAATCGATGAGCTCTTGTTGTCCATCATTGAATCTCGGAAGAATTCACCGAAGAAAAATTCTCAACAAGATTTGTTAGGTTTGTTGCTTCAAGGAAACCATCAGGTTGATGGCCGGTCAGGAAAGACATTAACATCTCGAGAAGTGGTTGATGAATGCAAGACTTTCTTCTTCGGAGGCCATGAAACCACAGCACTTTCCATCACATGGACCTTGTTGCTTCTAGCCATGCATGAAGATTGGCAAAACCAGTTGAGAGATGAGATAAGAGAAGTGGTGGGTGGCGACAAGCTTAATATCACCTTGCTCTCTGATTTAAAGAAGATGAAGTGCGTAATGAATGAAGTCCTAAGACTATACCCACCAGCACCGAATGTGCAAAGGCAAGCAAGGGAGGACATTAAAGTTGATGATATAACTGTGCCTAATGGAACCAACATGTGGATAGATGTGGTAGCGATGCACCACGATCCTGAATTATGGGGAAAGGATGCCAATGAGTTCAGACCAGAGAGGTTCATGGATGATGTGAATGGTGGGTGCAACCACAAGATGGGGTACTTGCCTTTTGGGTTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGACCTTTATGGAGTACAAGATTGTGTTGACACTGCTTCTCTCTAAGTTTAGGTTTAAGCTTTCCCCAGGTTACCATCATTCACCATCTATCATGCTCTCCCTGAGGCCTACTCATGGACTTCCTCTCATAGTTCAGCCCCTTTAG 1554 0.4356 MEFFLGLCGVLVAFSAALCLLLFSILTLYWWVFPNQKLKKLKKFGLGGPTPSFPLGNIGKMKRKNSIQSSVVSSNLSHDIHSNVFPYFSSWQKSHGKVFVYWLGTEPFLYVAEPEFLKKMSTVVMAKSWGKPSVFRTDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKAMANMMVESTNQMIERWATQINTGNPELDVEKEIIATAGEIIARTSFGMKDDNARDAIAKLRALQMTLFKSNRYVGVPFGKYFNVKKTLEAKKLGKEIDELLLSIIESRKNSPKKNSQQDLLGLLLQGNHQVDGRSGKTLTSREVVDECKTFFFGGHETTALSITWTLLLLAMHEDWQNQLRDEIREVVGGDKLNITLLSDLKKMKCVMNEVLRLYPPAPNVQRQAREDIKVDDITVPNGTNMWIDVVAMHHDPELWGKDANEFRPERFMDDVNGGCNHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSKFRFKLSPGYHHSPSIMLSLRPTHGLPLIVQPL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1281 517 Pfam Cytochrome P450 81 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1281 517 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 6 512 - -
Gso20g1281 517 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1281 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1281 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1281 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1281 517 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1281 517 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1281 517 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1281 517 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1281 517 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1281 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1281 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1281 517 Gene3D Cytochrome P450 28 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1281 517 SUPERFAMILY Cytochrome P450 80 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1281 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Gso20g1281 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1281 Gso-Chr20 42866089 42868756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1281 13 517 Cytochrome P450 AT5G52400 59.491 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1281 - - gmx:100803409 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1281 20 42866089 42868756 Gso10g2097 10 47957126 47959409 GST
Gso20g1281 20 42866089 42868756 Gso16g1505 16 35304253 35308049 PCT
Gso20g1281 20 42866089 42868756 Gso9g1132 9 32420185 32423962 PCT