Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1235 ATGGGCAAGGAGTGGCATCGGGAGGGAAGGTCCTCCAAGAGAGGTGGAGGTGCTCAAACAGAAATCCCTTCCGGTTGCATGTGTGCAATGTTTCAGGTATTTGATTTTCATCCTTTTCACTTTTCCATTGACCAGCAACATTCTTCTTTCAAGTCTCGCACCCCAGAAGACCACACTGTCCCCAAAGGAGTTGAAGCACCAAGGAGTAGCTTGGAGTCAGAAACTGGTACTACAGTGTCATCAATCTCAAAAGAGGAAAATTTTAAAATACCAAAGAACATTCGAATCAAAACAAGAGGGAGCACAAGATCAAGAACAGAAAGTTTTAGTGATTTTTCCTCAGAAATCGGTGCCTCTCCAGGGACCAAGACACCAACTTTGGTTGCAAGATTGATGGGTCTTGATCTTCTTCCCGATGCACATTCCTCTTCTTCCCCATGCCTTTCCACTCCAAACCTTCACAAACCACAGCAACACATCAAAATAATCAAACATAGAAACAGCACTGGCAGTAACGCCTTGCCTGAGACTCCTAGAATGTCCTCTGCAAGAAGATCAGATGTTGAGCATAGACAATCTCTCCAAATCAACAAGGAGAACAACACAGTCCCCTATGAGGATTCTGAGTCTCCTCGGTTTTCATTTTCAAAGAGGAAATATGATGAGAACAATTTCAGGAGTCCAAGCCACTATGCCAGGCAAATTGTGAAACAGATTAAAGAAAGTGTGAGCAGGAAGGTTGGACTAGACATCACCAACACTGTCAAGAACAGAGAACAAGGAAGAGAAGAATCTGTAGGCCAATTCAAATTCAAGAAAAAATCTAAAACTTCAGTGAATGAATCCAGCCCTGTAAAACACTCAAACTCATCTTACTCCCCAAGGCTCAACAGATTCATTGATACCAAACACAAACCAAGCACTACAACACAATCACCAACTACTCCAAAAAATCAAAACATACACATACTAAAACCACCATCAACAACTACTCCAAAAAATCTAAACACGCACTCAGTACTAAAACCACCATCACCTCCTCCTGTTGTCAACATTGAAACACAGCTTTCAAGAGTTTCTACAAAGCCAAAGCCTCAAGCATCGCCTGAGAAAGAGGTGCATAACCAAAAATCAGTAACAAAAGGCAAGAACACTGGCAGTGGAAAGTTGAGTTCCCGGGTCAACAAGCCTCCACAGACATCAATCAGAAACAAGCAAGAAGAGTCATTTATTACTCGTCCTCCATCAGCCACTAAAGCAAATGACATCAAAACCAAAAGCAAGAGAACTCATCCACTTTCAAGCAATCTTCTTAATAACCTCAACACGGTTCCAAATCTTCTCCCTGTCAAGACAGGACCTTCTCCTCAAAAACAGTCACAGCCGCAGGTACGTGATGATGATGCTCGAGATGAAAGACGCAGCGCACAGTTATTTAGTAGTTCGCGCCCGACGTACAAACAAGAAGCGCCACGATCACACCCACCCCGAGGAGCAACCACCAGCAGCGATGACGACAAACTTCACGGCACCTCCGCCACCACCACCGGCGCAGACGACGACGAAGGACCAGAATATCAGTACATTACAAGCATTCTAACTCGTAGTACCACCACTGGACCCCACAACAGCAACAGCGCTACAGCACCAATACCCCACCTCCAGTTTCAGTGGTTCTCTCCGACACACCCCTTGGACCCTTCCGTTTTTCACTGTCTCGAGCACTACCCAACATCCAATTCCTTTGTTTCCTTCCCCGGCGACAACAAAGATTGCATCTTTCAGCGGAAACAGCATCTGGGTCCGCGCTGCAACCGTAGATTGCTGTTCGATTTGGTCGACGAGTTGCTGTCGGAGATTCTGGTTCGGCCGAGGCGTTACAGAGAGGCGTTGTTGGAGACGACGGTGTGGGAGAGGGTTCGGAGATTCCCACGTGCGAAGTGTGAGGTTTTGGAGGATATTGATGCGTTGATTGAGATGGAGGAGATGAGGGAGGAAGAGAAAGAGGAAGGGGAAGGGTTGGTGAAAGAGATTGAAAGGAGCATGTTTGAGATGTTGGTGGATGAAACGTTTACCGTTATGGTTGGTGGCGTGGATAAGTACGTAGAGGACGACGTCGTTTGA 2124 0.46 MGKEWHREGRSSKRGGGAQTEIPSGCMCAMFQVFDFHPFHFSIDQQHSSFKSRTPEDHTVPKGVEAPRSSLESETGTTVSSISKEENFKIPKNIRIKTRGSTRSRTESFSDFSSEIGASPGTKTPTLVARLMGLDLLPDAHSSSSPCLSTPNLHKPQQHIKIIKHRNSTGSNALPETPRMSSARRSDVEHRQSLQINKENNTVPYEDSESPRFSFSKRKYDENNFRSPSHYARQIVKQIKESVSRKVGLDITNTVKNREQGREESVGQFKFKKKSKTSVNESSPVKHSNSSYSPRLNRFIDTKHKPSTTTQSPTTPKNQNIHILKPPSTTTPKNLNTHSVLKPPSPPPVVNIETQLSRVSTKPKPQASPEKEVHNQKSVTKGKNTGSGKLSSRVNKPPQTSIRNKQEESFITRPPSATKANDIKTKSKRTHPLSSNLLNNLNTVPNLLPVKTGPSPQKQSQPQVRDDDARDERRSAQLFSSSRPTYKQEAPRSHPPRGATTSSDDDKLHGTSATTTGADDDEGPEYQYITSILTRSTTTGPHNSNSATAPIPHLQFQWFSPTHPLDPSVFHCLEHYPTSNSFVSFPGDNKDCIFQRKQHLGPRCNRRLLFDLVDELLSEILVRPRRYREALLETTVWERVRRFPRAKCEVLEDIDALIEMEEMREEEKEEGEGLVKEIERSMFEMLVDETFTVMVGGVDKYVEDDVV* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1235 707 MobiDBLite consensus disorder prediction 463 477 - -
Gso20g1235 707 MobiDBLite consensus disorder prediction 103 121 - -
Gso20g1235 707 Coils Coil 657 677 - -
Gso20g1235 707 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 704 - -
Gso20g1235 707 MobiDBLite consensus disorder prediction 379 421 - -
Gso20g1235 707 Pfam Domain of unknown function (DUF4378) 525 689 IPR025486 -
Gso20g1235 707 Pfam DUF761-associated sequence motif 113 143 IPR032795 -
Gso20g1235 707 MobiDBLite consensus disorder prediction 195 209 - -
Gso20g1235 707 MobiDBLite consensus disorder prediction 258 525 - -
Gso20g1235 707 MobiDBLite consensus disorder prediction 281 340 - -
Gso20g1235 707 MobiDBLite consensus disorder prediction 430 462 - -
Gso20g1235 707 MobiDBLite consensus disorder prediction 167 223 - -
Gso20g1235 707 MobiDBLite consensus disorder prediction 47 83 - -
Gso20g1235 707 PANTHER DUF4378 DOMAIN PROTEIN 1 704 - -
Gso20g1235 707 MobiDBLite consensus disorder prediction 99 123 - -
Gso20g1235 707 MobiDBLite consensus disorder prediction 258 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1235 Gso-Chr20 42357117 42362421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1235 94 692 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 33.128 3.47e-54 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1235 - - gmx:102662912 1324.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1235 20 42357117 42362421 Gso10g2146 10 48487063 48491163 GST
Gso16g1603 16 36620758 36624925 Gso20g1235 20 42357117 42362421 PCT
Gso9g1225 9 35237677 35242047 Gso20g1235 20 42357117 42362421 PCT
Gso20g1235 20 42357117 42362421 Gso16g1603 16 36620758 36624925 PCT
Gso20g1235 20 42357117 42362421 Gso9g1225 9 35237677 35242047 PCT