Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1234 ATGCGTTGTTCATCTTTCTCTGAATGGATCTCAGTCAATATTGTTGTGGAAAGAAACATACGTTCAATATTGTTTCTTGTTTGTGCAATTATTTGTGGCTATATATATCAGTGTCCACCATTTCGGTTAAGCTACCAGGGGCTGGGAGAGCCCTTGTGCTTTGCAGCATTTGGGCCTTTTGCCACTTGTGCTTTTTATTTATTACATGGCAGTTCAAGTGTGATGAACCATTTCCCCTTAAGTGGAACGGTTCTTTCAGCATCAATTCTTGTTGGCTTCACAACATCTCTTATCTTGTTTTGCAGTCATTTCCATCAGGTGGAAGGAGACAGGGAGGTTGGGAAAATGTCACCTTTGGTTAGACTTGGCACTAAAAAAGGTGCAGAGGTAGTGAAAGGGGCAATCTTTATGCTCTATGCTCTTTTGGTTGCTTTTGGTCTAATCAAGGCACTTCCTCTCACTTGTATATTCCTTTGTGCATTGACCTTGCCGATGGGAAACCTAGTAGTTAGATTTGTCGAAGACAATTACAAGGACAAAAATAAGATTTTCATGGCTAAGTACTTCTGTCTGAGGCTTCATGCATTGTTTGGAGTTGCACTGGCTTTAGGACTAGTGCTGGCTCGAAAGAGTGTGGATGACCCTGGAAGACCCCCTGGCATTGTTCTTAGTGCTGCCACTTCTTTTTGGCTTCCTGTTCCTCCTAAACGAGTCTTTGACTTCCTCCGTGATGAAAACTCTAGGAATGAGGTGCTTTGGTTTTACCCATTATACGTGTTTAGTATAGTTCTTAGCACAATTTGGCAATTAGCATATTTTGCTTTACACTACTAA 834 0.4149 MRCSSFSEWISVNIVVERNIRSILFLVCAIICGYIYQCPPFRLSYQGLGEPLCFAAFGPFATCAFYLLHGSSSVMNHFPLSGTVLSASILVGFTTSLILFCSHFHQVEGDREVGKMSPLVRLGTKKGAEVVKGAIFMLYALLVAFGLIKALPLTCIFLCALTLPMGNLVVRFVEDNYKDKNKIFMAKYFCLRLHALFGVALALGLVLARKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRNEVLWFYPLYVFSIVLSTIWQLAYFALHY* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1234 277 PANTHER UBIA PRENYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 15 210 - -
Gso20g1234 277 CDD PT_UbiA_UBIAD1 14 204 IPR026046 GO:0004659
Gso20g1234 277 Pfam UbiA prenyltransferase family 19 187 IPR000537 GO:0016021|GO:0016765
Gso20g1234 277 PANTHER 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE 15 210 IPR026046 GO:0004659
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1234 Gso-Chr20 42349907 42353305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1234 196 250 Homeobox Transcription Factor Family AT1G05230 80.000 2.41e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1234 K23094 - gmx:100813101 545.814