Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1228 ATGGATCGAAGGACTATGTCTATGATGTCTAGCAAAGTTGATCCCTTCCAGCATCTCAAACTCGTCCCCAATTCCGACGGCACGATCACTCGCCAGCGTGATGACCCACCCATCTCACCCTCACTCAATCCCACCCTTCCCGTCCTCACCCAAGACGCAACCATCAACCGATCAAACAACACCTTCGCCCGCATATTCCTACCCCGCGAAGCACTCGATTCCTCCCCCTCCAACAACCTCCCTCTCGTCGTTTACTTCCACGGCGGCGGCTTCGTCCTCTTCAGCGCCGCCTCTGACTTCTTCCACGACGCATGCGTAAACCTCGCAGACGACACCAACTCCATCGTCGTTTCCGTGGAGTACCGCCTCGCACCGGAACACAGACTCCCCGCGGCGTACGAAGATGCCGTCGAAGCGCTGCACTGGATCAAAGCACAGTCAAACGATTGGTTGCGCAACCACGCGGATTTTTCCAACTGTTACCTTATGGGAAGTAGCGCCGGAGCAAACATCGCGTACCACGCGGGTCTACGTGTAGCTGCGGAGCTTAACGTTTATGGAGACAATTATCTGGCGCCACTTAAGATCAGAGGGCTGATATTGAGTCAGCCGTTCTTCGGAGGAACGAAGAGGGTGCCTTCTGAGGTGAGGCTTGTGGACGATCCGGTTTTGCCGCCGCACGTGTGTGACTTACTGTGGGAGTTGTCGCTGCCCCTGGGGGTTGACCGTGATCACGAGTATTGCAATCCGACGGCTGGCGATGGGCCTGTGATTCTGGATCGGGTGAGGCAGCTTGCGTGGCGGGTGCTGGTGAGTGGCTGCCATGGGGACCCACTTCTGGATCATCAGATGGCTCTGGCGAGACTGATAGAGGAGAAGGGTGTGGCTGTGGTCACCCGTTTTGACCAAGGGGGATGTCATGGGATTGAGGTTCGTGCTCGTAAGCACCAAAACCAACTCTATAACCTAGTCAAAGATTTTATTGCATAA 990 0.5566 MDRRTMSMMSSKVDPFQHLKLVPNSDGTITRQRDDPPISPSLNPTLPVLTQDATINRSNNTFARIFLPREALDSSPSNNLPLVVYFHGGGFVLFSAASDFFHDACVNLADDTNSIVVSVEYRLAPEHRLPAAYEDAVEALHWIKAQSNDWLRNHADFSNCYLMGSSAGANIAYHAGLRVAAELNVYGDNYLAPLKIRGLILSQPFFGGTKRVPSEVRLVDDPVLPPHVCDLLWELSLPLGVDRDHEYCNPTAGDGPVILDRVRQLAWRVLVSGCHGDPLLDHQMALARLIEEKGVAVVTRFDQGGCHGIEVRARKHQNQLYNLVKDFIA* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1228 329 PANTHER CARBOXYLESTERASE 120-RELATED 11 328 - -
Gso20g1228 329 Pfam alpha/beta hydrolase fold 83 309 IPR013094 GO:0016787
Gso20g1228 329 PANTHER ARYLACETAMIDE DEACETYLASE 11 328 - -
Gso20g1228 329 Gene3D alpha/beta hydrolase 16 329 IPR029058 -
Gso20g1228 329 SUPERFAMILY alpha/beta-Hydrolases 21 327 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1228 Gso-Chr20 42269369 42270706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1228 25 250 Carbohydrate Esterase AT5G16080 41.702 2.39e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1228 - - gmx:100777786 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1228 20 42269369 42270706 Gso16g1608 16 36700891 36702184 PCT
Gso20g1228 20 42269369 42270706 Gso9g1230 9 35382738 35386465 PCT