Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1227 ATGTCACTAAAGTCAGTTACTGTATTGACTACATATCTCATCTATGCATCCATAGTTGCTAAGTCAGCTATGGATCCCTACAAGGCCCTCAACATCATCCTCAACCCAAACGGAACCCTCACACGCTTAAGCATTCCTCCACAAAGCCCTCCCTCACCGGATCCCACTCTCCCCACAGCGGTTCTCTCCAAAGATCTCACCATCAACCAATCCAAGCACACCTGGGCCCGGATCTACCTACCCCACAAAGCACTCGATTATTCCCCCAACACCAACTCCAAACTACCCCTCATCGTGTTCTACCACGGTGGTGGCTTTCTCTTCTACAGCGCCAACTCCACTTACTTCCACGACTTCTGCGTCAGGATGGCCAACGACACTCAATCCGTCGTCGTTTCAGTCGACTACCGCCTCGCCCCGGAGCACCGACTCCCCGCGGCCTACGAAGACTCCGTGGAGGCGCTGCACTGGATCAAATCCTCCAACGACCCCTGGCTACGTCACGCGGATTACTCCCGTTGTTATCTCATGGGAGAGAGCGCCGGGGGCAATATCGCCTACACCGCGGGTCTACGTGCAGCCGCGGAGGTTGATCAGATCAAACCACTCAAAATAAAAGGGTTGATATTGATTCAACCGTTTTTCGGTGGGACCAAGAGGACTCCGTCAGAGGTAAGGCTTGCCGAGGATCAGACTCTACCTTTGCCTATCACTGATCTGATGTGGAATCTTTCATTGCCGGTTGGCGTCGACCGTGACTACGAGTATTCCAATCCAACGATCAAGGGTGGTGCTAAGATTTTAGATCGGATTAAGGCTCTTGGGTGGAAGGTTGCAGTGTTTGGGGTTGAAGGGGACCCACTGGTGGACCGTGAAAGAGAATTGGTGGGACTGCTACAGCACAAGGGTGTGCAAGTGGTTGGACTATTTTACCAAGGGGGTCGACATGGCATTTTCGTGGGTGACCCTTCTATGTCTGTTAAAGTCTTTGATCTACTCAAAACTCTTCATTGA 1014 0.5197 MSLKSVTVLTTYLIYASIVAKSAMDPYKALNIILNPNGTLTRLSIPPQSPPSPDPTLPTAVLSKDLTINQSKHTWARIYLPHKALDYSPNTNSKLPLIVFYHGGGFLFYSANSTYFHDFCVRMANDTQSVVVSVDYRLAPEHRLPAAYEDSVEALHWIKSSNDPWLRHADYSRCYLMGESAGGNIAYTAGLRAAAEVDQIKPLKIKGLILIQPFFGGTKRTPSEVRLAEDQTLPLPITDLMWNLSLPVGVDRDYEYSNPTIKGGAKILDRIKALGWKVAVFGVEGDPLVDRERELVGLLQHKGVQVVGLFYQGGRHGIFVGDPSMSVKVFDLLKTLH* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1227 337 Pfam alpha/beta hydrolase fold 98 319 IPR013094 GO:0016787
Gso20g1227 337 PANTHER ARYLACETAMIDE DEACETYLASE 22 330 - -
Gso20g1227 337 PANTHER CARBOXYLESTERASE 120-RELATED 22 330 - -
Gso20g1227 337 SUPERFAMILY alpha/beta-Hydrolases 35 323 IPR029058 -
Gso20g1227 337 Gene3D alpha/beta hydrolase 27 336 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1227 Gso-Chr20 42263609 42264778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1227 48 304 Carbohydrate Esterase AT1G68620 40.000 5.46e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1227 - - gmx:100777262 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1608 16 36700891 36702184 Gso20g1227 20 42263609 42264778 PCT
Gso9g1230 9 35382738 35386465 Gso20g1227 20 42263609 42264778 PCT
Gso20g1227 20 42263609 42264778 Gso16g1609 16 36705109 36706917 PCT
Gso20g1227 20 42263609 42264778 Gso9g1232 9 35417021 35418640 PCT