Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1195 ATGGCCTCTCATTCTCCCAATAGAGAAGGCCATTATCTTAATATTGTACTATTCCTTGCCTTTCTCATCTCCATCATCAACCCTTCACAACAAGACCCTTCTTCCCCTCTTCCCCCATTAAACCCAAGACTCACCAAAGCTTACACAGCACTCCAAGCATGGAAATACAAAATCACCTCAGACCCCAAAAACTTCACCTTAAACTGGTGTGGCCCCAATGTTTGCAACTACACTGGCATATACTGTGCACCTGCCCTAGATGACCCTCACATCTACACAGTTGCTGGAGTTGACCTAAACCATGCCACCATATCTGGTTCATTGCCAGAAGAACTTGGCCTCTTAACTGACCTATCACTTTTTCACATAAACTCCAATCGCTTCTGTGGTTCTCTTCCCAACAGCTTCGACAAACTCCACCTCCTCCATGAACTTGACATCAGCAACAACCAATTCTCGGGACCATTCCCCGAGGTTGTTCTTTGCATCCCTAACTTAAAATACTTGGATATCAGATTCAACAACTTCCACGGCAACGTTCCCTCGCGCCTCTTCGACGTCAAACTCGATGCACTCTTCATCAATAACAACAATTTCCAATTCTCTTTGCCCGAGAACTTGGGGAACAGTCCTGTCTCTGTTGTTGTGTTTGCAAACAATGACCTAAAAGGGTGTCTTCCTTTGAGTTTGGTTAAAATGAAAGGTACCCTTAACGAGATTATCATCACCAACAGTGGCTTAACGGGGTGTTTGCCTAGTGAGATAGGGGATTTGGACAAGGTGACTGTGTTTGATGTGAGCTTCAACAAGTTGGTTGGAGAATTGCCTGAGTCTTTGGGAAGAATGAAGAGGTTGGAGCAGCTGAATGTGGCGCATAACATGTTGTCTGGTGAGATTCCTGAGAGTGTTTGCATGTTGCCGAGGTTGGAGAATTTCACGTACTCTTATAACTACTTCTGCAGTGAGTCTCCAGTATGTCTCAAGTTGAAGGAGAAGGATGATACCAAGAATTGTATTCCTTATAGGCCGTTGCAAAAGTCACCTGATGAGTGTAAGGCTTTTTATGCACATCCTGTTCATTGTAGTGCCTTTGGTTGTGCATCGCCGCCGCCACCACCCCCTTCACCTCCACCTCCCCCTCCGCCTCCGCCTCCACCACCGCCACCGCCACCACCAGCATCTTACCACCACTATCCCTGA 1200 0.4658 MASHSPNREGHYLNIVLFLAFLISIINPSQQDPSSPLPPLNPRLTKAYTALQAWKYKITSDPKNFTLNWCGPNVCNYTGIYCAPALDDPHIYTVAGVDLNHATISGSLPEELGLLTDLSLFHINSNRFCGSLPNSFDKLHLLHELDISNNQFSGPFPEVVLCIPNLKYLDIRFNNFHGNVPSRLFDVKLDALFINNNNFQFSLPENLGNSPVSVVVFANNDLKGCLPLSLVKMKGTLNEIIITNSGLTGCLPSEIGDLDKVTVFDVSFNKLVGELPESLGRMKRLEQLNVAHNMLSGEIPESVCMLPRLENFTYSYNYFCSESPVCLKLKEKDDTKNCIPYRPLQKSPDECKAFYAHPVHCSAFGCASPPPPPPSPPPPPPPPPPPPPPPPPASYHHYP* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1195 399 Gene3D Ribonuclease Inhibitor 213 340 IPR032675 -
Gso20g1195 399 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 24 373 - -
Gso20g1195 399 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 373 - -
Gso20g1195 399 MobiDBLite consensus disorder prediction 367 399 - -
Gso20g1195 399 Gene3D Ribonuclease Inhibitor 46 212 IPR032675 -
Gso20g1195 399 SUPERFAMILY L domain-like 55 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1195 Gso-Chr20 41850836 41852303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1195 26 366 Leucine-rich Repeat extension Gene Families AT3G22800 67.251 1.48e-167 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1195 - - gmx:100813811 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1195 20 41850836 41852303 Gso10g2188 10 48925764 48927354 GST