Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1183 ATGGACATTGCAAGTTGTGCACTGCTCATTGTCTTGACATGTGCCATAGTTCATGCTCTTCTTGGTTCATTCCTTGCAATGGCCACAAAAGCAAACCATAAGCTGCCACCGGGACCATCCCGTGTTCCCATCATAGGTAACCTCCTTGAATTGGGTGAAAAGCCTCACAAGTCATTGGCAAAGCTTGCTAAGATACATGGCCCAATAATGAGCCTAAAGCTTGGACAAATAACCACTGTTGTTGTGTCTTCAGCACAAATGGCCAAAGAGGTGCTTCTAACCAATGACCAATTCTTGTCAAACCGAACCATTCCCCAATCCGTGTCAGTTCTAAACCATGAACAATACAGCCTTGCCTTCATGCCCATTTCACCTCTTTGGAGGGAACTCAGAAAAATATGCAACACTCAGTTATTTGCCCACAAGTCTCTTGATGCTAGCCAAGATGTTAGGCGTAAGATAGTGCAGCAACTAGTCTCCGATATCCATCAAAGCAGCCAGATAGGTGAAGCAGTGGATATTGGAACAGCAGCATTCAAGACTACCATAAATCTTTTATCAAACACTATCTTCTCTATGGATTTGATTCACTCTACAGGTAAAGCAGAAGAGTTCAAGGACTTGGTGACCAATATCACAAAGCTGGTTGGAACACCAAACTTGGCAGATTTTTTTCAAGTGTTAAAGTTGGTTGATCCACAGGGCGTCAAAAGGCGGCAGAGTAAGAATGTAAAGAAGGTGTTAGACATGTTTGACGACTTGGTTAGCCAACGGTTGAAGCAGAGGGAGGAAGGGAAAGTCCACAATGACATGTTAGATGCCATGCTCAACATTTCGAAAGATAACAAGTACATGGACAAGAATATGATTGAACATCTCTCACATGATATATTTGTTGCGGGAACAGATACAACAGCATCCACCCTTGAATGGGCAATGACTGAATTAGTCCGCAACCCAGATGTAATGTCAAAAGCAAAGCAAGAGCTTGAGCAAATGATTAGTAAAGGTAATAATCCTATAGAGGAAGCAGATATTGGGAAACTCCCATACTTGCAAGCAATAATAAAAGAGACATTACGATTGCACCCGCCAGTTCCATTTTTACTGCCACGAAAAGCTGATAAGGATGTGGATATAGGTGGCTACGCCATCCCAAAAGATGCACAAGTCTTGGTTAATACGTGGACTATTTGCAGGGACCCTACATTATGGGAAAATCCAAGTGTATTTTCACCAGACAGGTTTCTAGGATCTGACATTGATGTCAAGGGACGGAATTTTGAGCTTGCACCATTTGGTGCTGGGCGCAGAATATGCCCTGGCATGCTACTGGCCAATAGGATGTTGCTGTTAATGTTGGGTTCCCTTATCAACTCCTTTGATTGGAAGCTTGAACATGGCATAGAAGCACAAGATATGGACATAGATGATAAATTTGGAATTACCTTGCAAAAAGCACAGCCCCTTCGAATTCTTCCTGTTCCTGTCAAAATAAACAACTAG 1506 0.4263 MDIASCALLIVLTCAIVHALLGSFLAMATKANHKLPPGPSRVPIIGNLLELGEKPHKSLAKLAKIHGPIMSLKLGQITTVVVSSAQMAKEVLLTNDQFLSNRTIPQSVSVLNHEQYSLAFMPISPLWRELRKICNTQLFAHKSLDASQDVRRKIVQQLVSDIHQSSQIGEAVDIGTAAFKTTINLLSNTIFSMDLIHSTGKAEEFKDLVTNITKLVGTPNLADFFQVLKLVDPQGVKRRQSKNVKKVLDMFDDLVSQRLKQREEGKVHNDMLDAMLNISKDNKYMDKNMIEHLSHDIFVAGTDTTASTLEWAMTELVRNPDVMSKAKQELEQMISKGNNPIEEADIGKLPYLQAIIKETLRLHPPVPFLLPRKADKDVDIGGYAIPKDAQVLVNTWTICRDPTLWENPSVFSPDRFLGSDIDVKGRNFELAPFGAGRRICPGMLLANRMLLLMLGSLINSFDWKLEHGIEAQDMDIDDKFGITLQKAQPLRILPVPVKINN* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1183 501 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Gso20g1183 501 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 Pfam Cytochrome P450 36 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 498 - -
Gso20g1183 501 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 Gene3D Cytochrome P450 26 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1183 501 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1183 Gso-Chr20 41688893 41690825 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1183 1 495 Cytochrome P450 AT2G45550 45.455 3.36e-162 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1183 - - gmx:100807367 971.844