Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1182 ATGGACATTGCAAGTTGTGCACTGCTCATTGTCTTGACATGTGCCATAGTTCATGCTCTTCTTGGTTCATTCCTTGCAATGGCCACAAAAGCAAACCATAAGCTGCCACCGGGACCATCCCGTGTTCCCATCATAGGTAACCTCCTTGAATTGGGTGAAAAGCCTCACAAGTCATTGGCAAAGCTTGCTAAGATACATGGCCCAATAATGAGCCTAAAGCTTGGACAAATAACCACTGTTGTTGTGTCTTCAGCACAAATGGCCAAAGAGGTGCTTCTAACCAATGACCAATTCTTGTCAAACCGAACCATTCCCCAATCCGTGTCAGTTCTAAACCATGAACAATACAGCCTTGCCTTCATGCCCATTTCACCTCTTTGGAGGGAACTCAGAAAAATATGCAACACTCAGTTATTTGCCCACAAGTCTCTTGATGCTAGCCAAGATGTTAGGCGTAAGATAGTGCAGCAACTAGTCTCCGATATCCATCAAAGCAGCCAGATAGGTGAAGCAGTGGATATTGGAACAGCAGCATTCAAGACTACCATAAATCTTTTATCAAACACTATCTTCTCTATGGATTTGATTCACTCTACAGGTAAAGCAGAAGAGTTCAAGGACTTGGTGACCAATATCACAAAGCTGGTTGGAACACCAAACTTGGCAGATTTTTTTCCAGTGTTGAAGATGGTTGATCCACAGAGCATCAAAAGACGACAGAGTAAGAACTCGAAGAAGGTGTTGGACATGTTTAACCACTTGGTTAGCCAAAGGTTGAAGCAGAGGGAGGATGGGAAAGTTCACAATGACATGTTAGATGCCATGCTCAACATTTCAAATGATAACAAGTACATGGACAAGAATATGATTGAACATCTCTCACATGATATATTTGTTGCGGGAACAGATACAACAGCATCCACCCTTGAATGGGCAATGACTGAGTTAGTCCGCAATCCAGATGTAATGTCAAAAGCTAAACAAGAGCTTGAACAAATGACTAGTAAGGGTAATCCTATTGAGGAAGCAGATATTGCTAAACTTCCATACTTGCAAGCAATAGTAAAAGAGACATTAAGGTTGCACCCACCAGTTCCATTTTTACTACCACGAAAAGCTGGTAAGGATGTGGACATAGGTGGCTACACCATCCCAAAAGATGCAAAAGTGCTGGTTAATATGTGGACTATTTGCAGGGACCCCACATTATGGGACAATCCAACTATGTTTTCTCCAGACAGGTTCCTAGGATCTGATATTGATGTCAAAGGACGGAACTTTGAGCTTGCTCCATATGGTGCTGGGCGCAGAATATGCCCTGGCTTGCTATTGGCCAATAGGATGTTACTGTTGATGTTGGGTTCGCTTATCAACTCCTTTGATTGGAAGCTTGAACAAGGTATAGAAACACAAGATATCGACATGGATGATAAATTTGGAATTACCTTACAAAAAGCTCAACCCCTTCGAATTGTTCCTCTCAAAATAAACAACTAA 1497 0.4208 MDIASCALLIVLTCAIVHALLGSFLAMATKANHKLPPGPSRVPIIGNLLELGEKPHKSLAKLAKIHGPIMSLKLGQITTVVVSSAQMAKEVLLTNDQFLSNRTIPQSVSVLNHEQYSLAFMPISPLWRELRKICNTQLFAHKSLDASQDVRRKIVQQLVSDIHQSSQIGEAVDIGTAAFKTTINLLSNTIFSMDLIHSTGKAEEFKDLVTNITKLVGTPNLADFFPVLKMVDPQSIKRRQSKNSKKVLDMFNHLVSQRLKQREDGKVHNDMLDAMLNISNDNKYMDKNMIEHLSHDIFVAGTDTTASTLEWAMTELVRNPDVMSKAKQELEQMTSKGNPIEEADIAKLPYLQAIVKETLRLHPPVPFLLPRKAGKDVDIGGYTIPKDAKVLVNMWTICRDPTLWDNPTMFSPDRFLGSDIDVKGRNFELAPYGAGRRICPGLLLANRMLLLMLGSLINSFDWKLEQGIETQDIDMDDKFGITLQKAQPLRIVPLKINN* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1182 498 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1182 498 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1182 498 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1182 498 Gene3D Cytochrome P450 26 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1182 498 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1182 498 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1182 498 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1182 498 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1182 498 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1182 498 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1182 498 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1182 498 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1182 498 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 497 - -
Gso20g1182 498 Pfam Cytochrome P450 36 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g1182 498 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 497 - -
Gso20g1182 498 SUPERFAMILY Cytochrome P450 36 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1182 Gso-Chr20 41681305 41683083 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1182 1 495 Cytochrome P450 AT2G45550 45.059 1.33e-162 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1182 - - gmx:100805772 978.778