Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1181 ATGCCCAGCCTTTTCTCCAAACACCTCCACCTCTGTTTCTTGAAGCTCAAATACCCCACCATTCTCTGCCAACCTCACCACAGCGATCACACCCCACCACCCTCTTCTTCCGACAACTCCACAATCTTCCCCTTCACCGACACCACCACCACCACCTCCTCCGGCTCCTCCACTGAGCCAGACTTCGCCTCCATCTTCGCCTCGCAGCGCTTCTTCTTCTCCTCCCCGGGCACCTCCAACTCCATCGTCGAGTCCCCCGACACGCGCACCTTCATGATCCCCACCGGTGGCGGCGTCAGAGTCCCCAAGTACTCCCTCAACCCCTACGTTGATTTCCTCCGCTCAATGCAGGAAATGATCCGTTCTCGCCAAGTCTTGGACATCACTAAAGACTCCGAATATCTCCACGAACTTCTCCTTTGCTACCTCGCTCTCAACCCTACACACACTCACAAGTTCATCCTTCGCGCATTCACCGACCTCGTCCTCCAACTATTGTCCTCCGCCCCGTGTCTGACGCACAACCACAACCACCACCGACGCCACCGTAGTCTCTCCGGAAGGTTGCTGTAA 573 0.5672 MPSLFSKHLHLCFLKLKYPTILCQPHHSDHTPPPSSSDNSTIFPFTDTTTTTSSGSSTEPDFASIFASQRFFFSSPGTSNSIVESPDTRTFMIPTGGGVRVPKYSLNPYVDFLRSMQEMIRSRQVLDITKDSEYLHELLLCYLALNPTHTHKFILRAFTDLVLQLLSSAPCLTHNHNHHRRHRSLSGRLL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1181 190 MobiDBLite consensus disorder prediction 29 58 - -
Gso20g1181 190 Pfam Transcriptional repressor, ovate 105 165 IPR006458 -
Gso20g1181 190 MobiDBLite consensus disorder prediction 27 58 - -
Gso20g1181 190 PANTHER TRANSCRIPTION REPRESSOR OFP12 35 173 - -
Gso20g1181 190 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 35 173 IPR038933 GO:0045892
Gso20g1181 190 ProSiteProfiles OVATE domain profile. 101 164 IPR006458 -
Gso20g1181 190 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 101 167 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1181 Gso-Chr20 41658811 41659871 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso20g1181 Ovate 8.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1181 - - gmx:102666896 309.301