Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1099 ATGCCATTCATTCACAATTTCAGGATGGCTGCTCCGGCCATAGTTTCTAAAACTTTGCTCTTATTTCTTATTCTCCATGCCATTCTCATGTCTCTGGCCACATCACAGCCAAACTTCGTAAAACATTACTGTTTTGACCAAAATGGTAACTACACTGCTAATAGTACGTTTCAGGCCAACCTCAATACCTTGTTGTCCAACCTCTCTTCCAACACTGAAATCGACTATGGCTTCTACAATTTCTCAAATGGCCAAAACACTGACAAAGTCAACGTTATTGGGATGTGTAGAGGAGATCTTAAGCCAGAAGCTTGCCGTAGTTGCCTCAACAATTCAAGAATCCTTCTCACACAACTTTGTCCAAACCAGAAGGAGGCAATTGGGTGGTATGATCAGTGCATGTTGCGCTACTCTACCCGCTCAATATTTGGAATTATGGAATCTGATCCTTTGTATAATATACGGAACAACCAAAATGCAACAAATGTGGATCAGTATAATGAAGTTGTCGGGGACCTTCTGAGAAGTCTAGGAAACAGAGCTGCTGCCGGTGATTCTCAACTTAAGTATGCTCAAGCAAACAAAACAGGTCCAAGCTTTCAAACTATATTTGCTCATGTGCAATGCACACCTGATTTGACAGACTTGGAATGCAATCAGTGCTTGTTTGGAAAATTAATATCATATATCCCAAATTGCTGTGCTGGAAAAGTACGTGGCAGAATTTTTACACCGAGTTGTAATCTTAGATTTGATACCACCCCATACTTTGATCCTATTCCTACCACGGACGTCCCTCATTCGTCGATACCGCAAGCATTTCCTTCTCCTGCTCCATCAGCCATGCTCATCAAAGGCAAGAGCAACTCATGGAAAACTGCCATCGCAATAATTGTGCCAATTGTCTCCATTATGATACTCTTCACCTTTATGTGCTTCTTTTTGAGACGAAGGAAGCCAACGAAGTATTTTAAAAGTGAATCTGTAGCTGACTATGAAATTGAACCAACTGAGACCTTACAATTAGACTTCCAAACCATCATAGACGCAACAAATAACTTTGCAGATGTAAATAAGCTTGGAGAAGGTGGATTTGGACCAGTCTACAAGGGCAGGCTTCCCAATGGCGAAGAAGTTGCTATCAAACGGTTGTCCAAGGATTCTGGCCAAGGAGATATAGAATTTAAAAATGAACTGCTATTAGTAGCAAAGCTGCAACACCGAAATTTAGCAAGGGTATTGGGCTTTTGTTTGGAAACAGGAGAAAGGATACTGGTGTACGAGTTTCTTCCCAATAGAAGCCTTGACTACTTTATATTTGATCCAATCAAACGTTTAAATTTGGATTGGGAAAGGCGTTACAAGATTATACAAGGTATTGCTAGAGGTCTTCTTTATCTTCATGAAGATTCTAGATTGCGCATTATTCATCGCGATCTCAAAGCAAGCAACATACTCTTGGACGATGAAATGAATCCTAAGATATCAGATTTTGGCATGGCAAGACTGTTTGATGCAGATCAAACTCTTGGAAATACACGTAGAGTTGTTGGAACCTATGGATATATGGCACCGGAATATGCAATGCATGGGCATTTTTCTGTGAAGTCAGATGTTTTTAGTTTTGGCGTACTAGTTCTTGAGATAGTCACTGGACACAAAAATGGTGATATCCATAAGAGCGGTTATGTAGAACATCTAATAAGCTTTGTATGGACGAACTGGAGGGAAGGGACTGCCTTAAATATAGTAGATCAAACACTGCACAATAATTCAAGAGACGAAATAATGAGATGCATCCATATTGGATTACTTTGTGTTGAAGATAACGTAGCCAATAGACCAACCATGGCAACAGTTGTAATCATGTTTAACAGTAACTCTCTCGTTCTTCCTATACCCTCACAACCTGCATATTCTACGAATGTCAAAGGTCCATCAAGATCAAATGAATCAAGAAATAACTTCAAGCAAGCATCATCAAATGAAGTCTCCATTAGTGATCTAGATCCCCGCTAG 2019 0.4002 MPFIHNFRMAAPAIVSKTLLLFLILHAILMSLATSQPNFVKHYCFDQNGNYTANSTFQANLNTLLSNLSSNTEIDYGFYNFSNGQNTDKVNVIGMCRGDLKPEACRSCLNNSRILLTQLCPNQKEAIGWYDQCMLRYSTRSIFGIMESDPLYNIRNNQNATNVDQYNEVVGDLLRSLGNRAAAGDSQLKYAQANKTGPSFQTIFAHVQCTPDLTDLECNQCLFGKLISYIPNCCAGKVRGRIFTPSCNLRFDTTPYFDPIPTTDVPHSSIPQAFPSPAPSAMLIKGKSNSWKTAIAIIVPIVSIMILFTFMCFFLRRRKPTKYFKSESVADYEIEPTETLQLDFQTIIDATNNFADVNKLGEGGFGPVYKGRLPNGEEVAIKRLSKDSGQGDIEFKNELLLVAKLQHRNLARVLGFCLETGERILVYEFLPNRSLDYFIFDPIKRLNLDWERRYKIIQGIARGLLYLHEDSRLRIIHRDLKASNILLDDEMNPKISDFGMARLFDADQTLGNTRRVVGTYGYMAPEYAMHGHFSVKSDVFSFGVLVLEIVTGHKNGDIHKSGYVEHLISFVWTNWREGTALNIVDQTLHNNSRDEIMRCIHIGLLCVEDNVANRPTMATVVIMFNSNSLVLPIPSQPAYSTNVKGPSRSNESRNNFKQASSNEVSISDLDPR* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1099 672 ProSiteProfiles Protein kinase domain profile. 354 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g1099 672 Gene3D - 36 141 IPR038408 -
Gso20g1099 672 Gene3D - 148 256 IPR038408 -
Gso20g1099 672 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 647 - -
Gso20g1099 672 CDD STKc_IRAK 360 625 - -
Gso20g1099 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Gso20g1099 672 ProSiteProfiles Gnk2-homologous domain profile. 39 142 IPR002902 -
Gso20g1099 672 Gene3D Phosphorylase Kinase; domain 1 317 429 - -
Gso20g1099 672 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 17 647 - -
Gso20g1099 672 MobiDBLite consensus disorder prediction 640 672 - -
Gso20g1099 672 Pfam Protein tyrosine and serine/threonine kinase 358 621 IPR001245 GO:0004672|GO:0006468
Gso20g1099 672 ProSiteProfiles Gnk2-homologous domain profile. 148 256 IPR002902 -
Gso20g1099 672 SUPERFAMILY Protein kinase-like (PK-like) 340 648 IPR011009 -
Gso20g1099 672 SMART serkin_6 354 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g1099 672 Gene3D Transferase(Phosphotransferase) domain 1 430 630 - -
Gso20g1099 672 Pfam Salt stress response/antifungal 44 139 IPR002902 -
Gso20g1099 672 Pfam Salt stress response/antifungal 158 253 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1099 Gso-Chr20 40773495 40776644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1099 44 672 Receptor kinase-like Gene Family AT4G21410 50.536 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso20g1099 PK_Tyr_Ser-Thr 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1099 - - gmx:100782266 1345.87