Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1094 ATGGCTGGTGTTTCTTTTTGGCTCCTTTCCTTTGTTTTATGTCTCTTTATCATAATTACCTCACAAGCCAGTGCCCAGACATGTGATAACAGCAGAGGCAACTACACAATAAACAGCACCTACCACAACAACCTCAACACCCTCTTATCCAGTTTCTCTTCCCACACGGAAATCAACTACGGTTTCTACAATCTCTCATATGGTCAAGGCACAGACAAAGTATACACCATTGGACTCTGTACAGGTGATCAAAACCAGGATGACTGCCTCAGATGCCTCAACGTTGCCAGAGGCAATCTCACACAGCTTTGTCCAAACCAGAAAGAGGCTATTCACTGGAGAGTAGAGTGCTTGCTACGCTACTCTAACCGCCCCATATTTGGCACCGTGCAAAATGAACCTATGCAGATACTCTACTTGATAACAAACGTAACGGGTTCGGTGGATCAGTTCAACGCAGTGGTCGAGAGCTGGATGACGAATTTAACTCGCAAAGCTGCCTCGGGTGACTCTCGTCGTAAATATGCTACGGGCACTACCTTTGCTCCGAATTTTCAAACCATAAATGGTCAAACGCAGTGCACGCCTGATTTGTCATCGGAAGAATGCACTAACTGCTTGATGGAATCTATGGCATCAATCATAGATTGTTGTAGTGGACATGCTGGAGGCTCTGTTTTAAAACCCAGTTGTAGATTTAGATTTGACCCCTACACTTACTACGGACCAACACTGAGATTAGACCCAGATTCACCACCACCGACAATGGCCCCGCCACCATCACCGTCTACCAACAAAACTTCTTCTTCACAATCACAAGCAAGTGCAGGAAAGAGCAAGACAGCACGAACTATCATTGCCATAACAGTCCCAGTTGCTAGTGTTGTTTTAGCGCTTGGTCTTTTCTGCATTTTTCTAGCAGTGAGGAAGCCAACAAAAAAAAGCGAAATTAAAAGAGAAGAAGATAGTCATGAAGATGAAATTACCATTGATGAGTCATTGCAATTCAATTTTGACACCATTCGAGTTGCTACAAATGAATTCGATGATTCTAATAAACTTGGAGAAGGCGGGTTTGGAGCGGTTTACAGCGGCCGGCTTTCCAATGGACAAGTAATTGCTGTCAAAAGGTTGTCAAGGGATTCTGGGCAGGGAGATATAGAATTCAAGAGTGAAGTGCTTTTAATGGCCAAGCTTCAACACCGAAATTTAGTTAGGCTACTTGGTTTCTGTTTGGAAGGAAGAGAAAGGTTGCTTGTTTATGAATATGTTCCTAATAAAAGCCTTGATTGCTTCATATTTGATCCAATAAAGAAAAAACAATTGAATTGGCAAAGGCGGTACAAAATCATTGAAGGTATCGCTCGAGGCATTCTCTACCTCCACGAGGATTCTCGATTACGAATTATACATAGAGACCTCAAAGCAAGTAACATTCTCTTGGACGAAGAGATGCATCCTAAGATATCAGATTTTGGGATCGCAAGATTGGTTCAGGTGGATCAGACACAAGCATATACAAATAAAATTGTTGGAACCTATGGATATATGGCACCTGAGTATGCAATATATGGTCAGTTTTCAGCAAAATCAGATGTTTTTAGTTTTGGTGTATTGGTTCTTGAGATTGTAAGTGGCCAAAAAAACACTGGTATTCGTCGTGGGGAGAACGTGGAGGATCTATTGAATTTGGCATGGCGAAACTGGAAGAATGGAACAGCTACAAATATTGTAGACCCCTCATTAAACGACGGTTCTCAAAATGAAATAATGAGATGCATTCACATTGCATTATTATGTGTTCAAGAAAATGTGGCTGCCAGACCAACCATGGCTTCTATTGCACTCATGTTTAATAGCTATTCTCTCACTCTCCCGGTGCCTTCAGAACCTGCGTTTGTTGTGGATAGTAAAACTAGAAGCCTTCCTGACGCATGGTCATCAGGGTATAATTCAAGGGAAACAAGATCAACTAAATCCACAAATAAATCAATTGAATATTCAGTAGATGATTCTTCAATTACAGAGCCATATCCTCGCTAG 2043 0.418 MAGVSFWLLSFVLCLFIIITSQASAQTCDNSRGNYTINSTYHNNLNTLLSSFSSHTEINYGFYNLSYGQGTDKVYTIGLCTGDQNQDDCLRCLNVARGNLTQLCPNQKEAIHWRVECLLRYSNRPIFGTVQNEPMQILYLITNVTGSVDQFNAVVESWMTNLTRKAASGDSRRKYATGTTFAPNFQTINGQTQCTPDLSSEECTNCLMESMASIIDCCSGHAGGSVLKPSCRFRFDPYTYYGPTLRLDPDSPPPTMAPPPSPSTNKTSSSQSQASAGKSKTARTIIAITVPVASVVLALGLFCIFLAVRKPTKKSEIKREEDSHEDEITIDESLQFNFDTIRVATNEFDDSNKLGEGGFGAVYSGRLSNGQVIAVKRLSRDSGQGDIEFKSEVLLMAKLQHRNLVRLLGFCLEGRERLLVYEYVPNKSLDCFIFDPIKKKQLNWQRRYKIIEGIARGILYLHEDSRLRIIHRDLKASNILLDEEMHPKISDFGIARLVQVDQTQAYTNKIVGTYGYMAPEYAIYGQFSAKSDVFSFGVLVLEIVSGQKNTGIRRGENVEDLLNLAWRNWKNGTATNIVDPSLNDGSQNEIMRCIHIALLCVQENVAARPTMASIALMFNSYSLTLPVPSEPAFVVDSKTRSLPDAWSSGYNSRETRSTKSTNKSIEYSVDDSSITEPYPR* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1094 680 ProSiteProfiles Gnk2-homologous domain profile. 23 126 IPR002902 -
Gso20g1094 680 SMART serkin_6 348 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g1094 680 MobiDBLite consensus disorder prediction 247 261 - -
Gso20g1094 680 Gene3D - 136 240 IPR038408 -
Gso20g1094 680 Gene3D - 21 125 IPR038408 -
Gso20g1094 680 Gene3D Transferase(Phosphotransferase) domain 1 424 624 - -
Gso20g1094 680 MobiDBLite consensus disorder prediction 244 276 - -
Gso20g1094 680 SUPERFAMILY Protein kinase-like (PK-like) 333 644 IPR011009 -
Gso20g1094 680 CDD STKc_IRAK 354 619 - -
Gso20g1094 680 MobiDBLite consensus disorder prediction 642 680 - -
Gso20g1094 680 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Gso20g1094 680 ProSiteProfiles Protein kinase domain profile. 348 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g1094 680 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 5 663 - -
Gso20g1094 680 Pfam Salt stress response/antifungal 28 123 IPR002902 -
Gso20g1094 680 Pfam Salt stress response/antifungal 148 236 IPR002902 -
Gso20g1094 680 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
Gso20g1094 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Gso20g1094 680 ProSiteProfiles Gnk2-homologous domain profile. 132 240 IPR002902 -
Gso20g1094 680 Pfam Protein tyrosine and serine/threonine kinase 352 615 IPR001245 GO:0004672|GO:0006468
Gso20g1094 680 MobiDBLite consensus disorder prediction 262 276 - -
Gso20g1094 680 MobiDBLite consensus disorder prediction 642 671 - -
Gso20g1094 680 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1094 Gso-Chr20 40709151 40712696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1094 26 637 Receptor kinase-like Gene Family AT4G38830 49.433 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso20g1094 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1094 - - gmx:100784215 1153.66