Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1076 ATGCCCTCCTCCTCAACAATGCCTCTCTCGCCGGACCCTCCCTTCCTCTGCACCGAAGACGCCAGCGAAGTCACCTCCGACCACCACCATCCACCGTCCCCCTTCCCGGATTCCGACGAGGCCGCCATCGCCGGACTCCTTGACGCCGAGCCCCACCACATGCCGGAAAAGGACTACCTCCGCCGCTGCCGCGACCGCTCCGTGGACGTCACCGCTCGCTTGGACGCCGTCAACTGGATCTTAAAGGTCCACGCATTCTACGAGTTTTCCCCGGTAACGGCGTTTCTCTCCGTCAACTATTTGGACCGTTTTCTCTCTCGATGTTCTCTTCCGCAAGAAAGTGGTGGGTGGGCATTTCAGCTGCTATCAGTGGCATGTTTGTCTCTAGCAGCGAAAATGGAGGAGTCCCATGTGCCTTTCTTACTGGACCTTCAATTGTTTCAGCCCAAGTTCGTCTTCGAGCCCAAAACGGTTCAGAGAATGGAACTATGGGTTATGTCTAACCTCAAATGGAGACTCCGCTCTGTCACCCCCTTCGACTATCTTCATTATTTCTTCACCAAGCTCCCTTCTTCCTCTTCCCAATCCATCACCACTGCCTCCAACCTCATTCTCAGCACCACTCGTGTCATTAACTTCTTGGGATTTGCGCCGTCCACCGTCGCAGCCGCTGCCGTGCAGTGCTCCGCCAACGGCCAATTACCGCTGAGTTTTCATGACAGATTAAACAGTGAAATGGTGAGATGCTGTCACCAACTAATGGAGGAGTACGTGGTGGACACGTGTCCCGCATCCATTAAAGTCAGAATAACCGAGGCGGCGGCGCCGTCCAGCCCCGTCGGCGTGCTCGACGCCGCCACCTGTGGGAGCTGCGACACACCTTCCGAGAGGAATTTTGCTGGCTCAGCCGAGGAACAAGCCGAGCCGCCAAATAAACGGCTTCGATCCTCTGCCTCGGATGCACCCCGGCGGTAG 975 0.5672 MPSSSTMPLSPDPPFLCTEDASEVTSDHHHPPSPFPDSDEAAIAGLLDAEPHHMPEKDYLRRCRDRSVDVTARLDAVNWILKVHAFYEFSPVTAFLSVNYLDRFLSRCSLPQESGGWAFQLLSVACLSLAAKMEESHVPFLLDLQLFQPKFVFEPKTVQRMELWVMSNLKWRLRSVTPFDYLHYFFTKLPSSSSQSITTASNLILSTTRVINFLGFAPSTVAAAAVQCSANGQLPLSFHDRLNSEMVRCCHQLMEEYVVDTCPASIKVRITEAAAPSSPVGVLDAATCGSCDTPSERNFAGSAEEQAEPPNKRLRSSASDAPRR* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1076 324 Pfam Cyclin, C-terminal domain 176 258 IPR004367 -
Gso20g1076 324 CDD CYCLIN 73 163 IPR013763 -
Gso20g1076 324 MobiDBLite consensus disorder prediction 1 37 - -
Gso20g1076 324 ProSitePatterns Cyclins signature. 73 104 IPR006671 -
Gso20g1076 324 SMART cyclin_7 78 167 IPR013763 -
Gso20g1076 324 SUPERFAMILY Cyclin-like 32 173 IPR036915 -
Gso20g1076 324 MobiDBLite consensus disorder prediction 294 324 - -
Gso20g1076 324 SMART Cyclin_C_2 176 279 IPR004367 -
Gso20g1076 324 Pfam Cyclin, N-terminal domain 48 173 IPR006671 -
Gso20g1076 324 Gene3D - 46 237 - -
Gso20g1076 324 PANTHER CYCLINS 24 314 IPR039361 -
Gso20g1076 324 Gene3D - 56 174 - -
Gso20g1076 324 PANTHER CYCLIN-D2-1-LIKE 24 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1076 Gso-Chr20 40497391 40499452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1076 6 261 Core Cell Cycle Gene Families AT1G70210 43.066 2.83e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1076 K18810 - gmx:100776178 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1076 20 40497391 40499452 Gso10g2282 10 49884344 49886523 GST