Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1037 ATGATGATCACAGAAGATGAAACAACTCTTACAACAGGCAAAGAACAACAAAGTGAAGTGATGAACGGAGACAAGGACAATCATGGAAGCGAAGATGGCAACCCCAAAGAGTGGTTGAACCTGAGCATAGGTGGAACTTCTTCACTATCAACATCTGGAGACACTGATTCACAAGCAAGACCACCAGCCACTGCCAAAGTTTTTTCATGCAACTTCTGCATGAGGAAGTTCTTTAGCTCACAAGCACTAGGAGGCCATCAGAACGCGCACAAGAGGGAAAGGGGAGCTGCCAGAAGATACCAATCTCAGAGATCGATGGCAATAATGGGATTCTCCATGAACACACCAACTATGTTTCGATCACTTGGTGTTCAGCCCCATTCACTTGTGCACAAGCCACGCAGAGGTGGTGGTACCATGGTGACACCGGGCTTTCATGATGCAAATGCACATGCAAGACTTGGGATGGCATGGACACCTTTCTCGACCGAGGATCAAGCAGATATGGTGTGGCCAGGCAGCTTTCGCTTGGTTCCACAGGAGCCACTCAAGCTTGATTTAGGCCTAAGACTCTGA 576 0.4809 MMITEDETTLTTGKEQQSEVMNGDKDNHGSEDGNPKEWLNLSIGGTSSLSTSGDTDSQARPPATAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRSMAIMGFSMNTPTMFRSLGVQPHSLVHKPRRGGGTMVTPGFHDANAHARLGMAWTPFSTEDQADMVWPGSFRLVPQEPLKLDLGLRL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1037 191 MobiDBLite consensus disorder prediction 40 61 - -
Gso20g1037 191 Gene3D Classic Zinc Finger 50 115 - -
Gso20g1037 191 SUPERFAMILY beta-beta-alpha zinc fingers 65 94 IPR036236 -
Gso20g1037 191 MobiDBLite consensus disorder prediction 19 33 - -
Gso20g1037 191 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Gso20g1037 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 95 IPR013087 -
Gso20g1037 191 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 191 - -
Gso20g1037 191 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 191 - -
Gso20g1037 191 MobiDBLite consensus disorder prediction 1 18 - -
Gso20g1037 191 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1037 Gso-Chr20 40151736 40154111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1037 61 176 C2H2 Transcription Factor Family AT1G66140 37.931 1.71e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1037 - - gmx:100811125 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1037 20 40151736 40154111 Gso10g2318 10 50181171 50182736 GST