Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1032 ATGGAGGCCAAGAAGGAGTATGAAGTGGACCATCTGACCACACTCACAGGGACCAGTTTCTCTCAGTTACTATTCGGAGATGATGACGACGATTATGATGAAAGTGCATTGGGACTCGCTGTGGACCAGTCTTACACCCGTTCACCTCTTTTCTCCATTCACAAGGCACCCCAAATGCTTTGTTTTGCCAACCATCAAAACCAAGGTGACGTTTTGCTTCCTGAAACCAACGTAACCCCTCAGAAATCTGTCATCACTTCTAGTGACTCCTCTTCTGCTAGCGCTTCCTCCTGCAACCACACCAACACCGCCTTCAATTCCTTACCTAAGTCTAATAAAAAGCGAAATGGGATGGGGCAAGAATCAGTGACCAAGGTTGGTGTTGGAAGCCAGAGACAAACTAAGAAGAACAAAGCAGAGAACCCCACCTCAACCGGACATGCAAAGAGGAAGGAGAAGCTCGGGGAACGAATTGCAGCGTTACAACAGCTTGTTTCTCCCTTTAGCAAGACGGATACAGCATCTGTGCTTCACGAGGCAATGGGTTATATAAGATTTCTTCATGACCAAGTTCAGGTCCTATGCTCTCCTTACTTGCAAAGTTTGCCTTCCTCGTACCATCAAAATCAGCATGGGGACGGAGTTATCAATGAAGAGGAAGTGAACAAGGATTTGAGGAGTAGGGGTCTTTGCTTGATCCCTGTGGGATGCACCGTACACGTGGCAGGTAGCAATGGTGCTGATTTCTGGTCATCTGCCGCAACAGGGAACAATGTTAATTTCACCATCAGCCAAGCAGTGAAACGAAACCAAGATCAATGA 822 0.4708 MEAKKEYEVDHLTTLTGTSFSQLLFGDDDDDYDESALGLAVDQSYTRSPLFSIHKAPQMLCFANHQNQGDVLLPETNVTPQKSVITSSDSSSASASSCNHTNTAFNSLPKSNKKRNGMGQESVTKVGVGSQRQTKKNKAENPTSTGHAKRKEKLGERIAALQQLVSPFSKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQSLPSSYHQNQHGDGVINEEEVNKDLRSRGLCLIPVGCTVHVAGSNGADFWSSAATGNNVNFTISQAVKRNQDQ* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1032 273 CDD bHLH_AtbHLH_like 149 194 IPR045239 -
Gso20g1032 273 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 199 IPR036638 GO:0046983
Gso20g1032 273 MobiDBLite consensus disorder prediction 82 152 - -
Gso20g1032 273 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 55 245 - -
Gso20g1032 273 MobiDBLite consensus disorder prediction 82 141 - -
Gso20g1032 273 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 138 187 IPR011598 GO:0046983
Gso20g1032 273 Gene3D - 129 209 IPR036638 GO:0046983
Gso20g1032 273 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 55 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1032 Gso-Chr20 40115520 40118166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1032 149 255 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 55.556 9.30e-35 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1032 - - gmx:100809317 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1032 20 40115520 40118166 Gso10g2323 10 50206164 50212619 GST