Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1027 ATGGGAATAATTACTGTCTCCATTTTGTTGGGAAACACTCTTCTTCTTGTTGCTGTTGCTCAGAGCTTTCACCACCCAAAACAACAACATGATTTGTGTGAAGAGCTCATTATCCCCTCCGGTTACCCCTGCTCCCAATATACGATTCAAACGAAGGATGGTTTCCTGCTAGGTCTTCAGCGCGTCTCTTCTTCTTCTCTTGGGCTTGGGTACGATGGAGAACGAGGCCCTCCGGTTCTGCTTCTGCTTCTGCATGGCTTATTCATGGCAGGTGATCATGCATGGTTTATAAATACTCCAGATCAATCACTTGGCTTCATACTTGCGGATCATGGTTTTGATGTTTGGGTAGGAAATGTGCGCGGAACACGCTGGAGCCACGGGGACTTAGCCATGTATGATCTTGCAGAAATGATCAATTACATTAATTCAGTAACAAACGCAAAGCTATTAGTCCTCGGGCATCCACAGGGTAAAATGTCTTTCGCTGCCTTCACTCAACCGGAGATAGCAGAAAAGGTTGAACAACTGAACCACAAAAGAACCACTCCCACGTTGCTCCGTCATAATGATAAAGCCAGAGATCCTACTTCTTCTTTGTTTCAGCCTCAACAAAGTTCCCCGCAACACTTTCAGGGTCTTGCTATGGCATTGCTATTTCTAATAGGATATGCAGTCATCATATTTGAAGAATATCTAGGGATCAATAAAAGCGGAGTGGGACTGTTGATGGCTGTAGGCTTGTGGGTGATACGGAGTATTTGGGCTCCATCAACTGATATAGCTGTTTCAGAGCTAACTCATGCATCTGCAGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATAGTTGACACTCATGGAGGATTTAAGCTGGTTACAGACAATATAACAACCCAAAACCCACGCCTTCTCCTATGGGTGATTGGATTTATTACATTCTTTCTCAGTTCAGTTCTAGACAGCCTGGCATCCACCATAGTCATGATTTCTCTGTTGCAGAAATTAGTACCTCTGTCAGAGTATCAGAAGATATTGGGAGGTGTTGTTGTAATAGCAGCAAATGCTGGTGGTGCATGGAGTCCTATTGGTGCTGTTACCACTACTATGCTGTGGATAAATGGCCAAGTATCTGCAGTGCAAACAATGAAGGGTTTGTTTTTACCTTCAGTCATTTCTCTAGTTGTTCCTCTGGTTCTGATGTCCTTGACTAGTGGAGTTAATGGGAAGGAACAAAGGTCTCTGGATGTCTTTGCCTCTGAACCGATTGCTCCTCGAGGGCAGCTTGTTTTCTCAGTGAGTTTAGGAGCTTTGATTTTTGTCCCAGTGTTCAGGTCCCTCACAGGTTTACCTCCGTACATCGGAATGCTGCTCGGACTTGGCATGCTTTGGATTTTCGTTGATGCTATCCATTATGGTGAATCTGAAAGGCAGAAGCTAAAAGTGCCACATGCTCTGTCAAGGATAGACACTCAAGGAGCACTATTTTTCTTGGGAATTCTATTATCCGTTAGCAGCCTGGAGGTAGCAGGGATTCTTCGGGAAATAGCAAATTACTTTGATGCACATGTCCCAAGATGTGAACTGATTGCAAGTGCTATTGGACTAATATCTGCAGTAATAGACAATGTTCCATTGGTTGCTGCCACAATGGGAATGTATGATGTCTCTTCTTTCCCTCAAGATTCTGAGTTCTGGCAAATGATTGCATTATGTGCTAGTACTGGCGGATCCATATTAATTATTGGCTCAGCTGCTGGAGTTGCGTTCATGGGGATGGAAAAGGTGGACTTCTTTTGGTACTTACGGAAGGTTAGTGGCTTTGCCTTAGCAGGTTATGCTGCTGGTATTGCGGCCTATTTAGCGCTTCATAATCTCAACATCTTCCAACCAACACTTGCAGAGGTTCATTTCCTTTCTGGTTCTTAA 1947 0.4391 MGIITVSILLGNTLLLVAVAQSFHHPKQQHDLCEELIIPSGYPCSQYTIQTKDGFLLGLQRVSSSSLGLGYDGERGPPVLLLLLHGLFMAGDHAWFINTPDQSLGFILADHGFDVWVGNVRGTRWSHGDLAMYDLAEMINYINSVTNAKLLVLGHPQGKMSFAAFTQPEIAEKVEQLNHKRTTPTLLRHNDKARDPTSSLFQPQQSSPQHFQGLAMALLFLIGYAVIIFEEYLGINKSGVGLLMAVGLWVIRSIWAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDTHGGFKLVTDNITTQNPRLLLWVIGFITFFLSSVLDSLASTIVMISLLQKLVPLSEYQKILGGVVVIAANAGGAWSPIGAVTTTMLWINGQVSAVQTMKGLFLPSVISLVVPLVLMSLTSGVNGKEQRSLDVFASEPIAPRGQLVFSVSLGALIFVPVFRSLTGLPPYIGMLLGLGMLWIFVDAIHYGESERQKLKVPHALSRIDTQGALFFLGILLSVSSLEVAGILREIANYFDAHVPRCELIASAIGLISAVIDNVPLVAATMGMYDVSSFPQDSEFWQMIALCASTGGSILIIGSAAGVAFMGMEKVDFFWYLRKVSGFALAGYAAGIAAYLALHNLNIFQPTLAEVHFLSGS* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1027 648 Gene3D alpha/beta hydrolase 20 181 IPR029058 -
Gso20g1027 648 Pfam Partial alpha/beta-hydrolase lipase region 34 98 IPR006693 GO:0006629
Gso20g1027 648 SUPERFAMILY alpha/beta-Hydrolases 35 155 IPR029058 -
Gso20g1027 648 Pfam Citrate transporter 224 578 IPR004680 GO:0016021|GO:0055085
Gso20g1027 648 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 180 646 IPR045016 GO:0006814|GO:0015297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1027 Gso-Chr20 40071126 40083969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1027 212 648 Antiporters AT3G19490 78.995 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1027 - - gsj:114401198 1188.71