Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0988 ATGTCCATCCTACGCCGCCTCCACCTAAACCTTCGCACCACCACCCGCCGCCGCCGCCTTGCCACCGCTTCCGCCGCACTACGCCAGGACACCACCGTCTGGACCCCGGCCCCTCTCTCCGAGGTCGAGCACGCCGCCGAGTCCCTCTTCCACATCGCCATCGACGTCTCCGACGCGCCCGATCACGCCGCGTCCCACACACTCGCCGGGCAGTACCTCCAGCTCCGCCTCCCCGACGCGCTCAAGCCCTCGTTTCTGGCCATCGCGTCGCCGCCGAAGCTCGCCGCGGCGCGTGGAGTGTTCGAGTTTCTGGTGAAGAGCGTGGCGGGGTCCACCGCGGAAGCGCTGTGCGCGTTGAAGAGAGGGGATGTGGTTGAACTCAGCCAAGTCATGGGAAACGGATTCAACATCGATCGGATCCACCCTCCGAAGAATTTTGGAACCGTTCTCGTCTTCGCCACTGGATCTGGAATTAGTCCAATTCGGTCGCTTATTGAGTCAGGATTTGATGCTGCGAAGAGGTCTGATGTGAGACTATATTATGGGGCCAGGAACCTTCAGAGAATGGCTTATCAGGATAGGTTTAAAGATTGGGAATCTTCCGGTGTGAAGATTGTGCCTGTATTGTCTCAACCAGATGAGAGTTGGACTGGGGAAAGTGGCTATGTTCAGGCTGCATTTTCAAGAGAGAAGCAAATATCTGACCCACTGGCAACTGGTGCTGTACTTTGTGGACAGAAACAGATGACCGAGGAAGTGACATCAATTCTTGTTGCTGCTGGAGTATCCGCTGATAAGATATTGAAGAACTTCTGA 816 0.565 MSILRRLHLNLRTTTRRRRLATASAALRQDTTVWTPAPLSEVEHAAESLFHIAIDVSDAPDHAASHTLAGQYLQLRLPDALKPSFLAIASPPKLAAARGVFEFLVKSVAGSTAEALCALKRGDVVELSQVMGNGFNIDRIHPPKNFGTVLVFATGSGISPIRSLIESGFDAAKRSDVRLYYGARNLQRMAYQDRFKDWESSGVKIVPVLSQPDESWTGESGYVQAAFSREKQISDPLATGAVLCGQKQMTEEVTSILVAAGVSADKILKNF* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0988 271 PANTHER - 3 271 - -
Gso20g0988 271 Gene3D Translation factors 27 132 - -
Gso20g0988 271 Gene3D - 147 271 IPR039261 -
Gso20g0988 271 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 32 137 IPR017927 GO:0016491
Gso20g0988 271 CDD FNR_like 40 268 - -
Gso20g0988 271 PANTHER F9L1.8 PROTEIN 3 271 - -
Gso20g0988 271 SUPERFAMILY Riboflavin synthase domain-like 34 134 IPR017938 -
Gso20g0988 271 PRINTS Phenol hydroxylase reductase family signature 67 79 - -
Gso20g0988 271 PRINTS Phenol hydroxylase reductase family signature 150 169 - -
Gso20g0988 271 PRINTS Phenol hydroxylase reductase family signature 175 184 - -
Gso20g0988 271 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 143 268 IPR039261 -
Gso20g0988 271 Pfam Oxidoreductase NAD-binding domain 153 253 IPR001433 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0988 Gso-Chr20 39640527 39643472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0988 70 265 NADPH P450 reductases AT5G17770 25.714 3.65e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0988 - - gmx:100790250 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0988 20 39640527 39643472 Gso10g2373 10 50618821 50621875 GST