Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso20g0974 | ATGGGTTTGCAAAACCAATTAAACGACGTGTCGTCGGGTTCGATTCCGCTGCTGGTCTTGGCGCAGATAGCGACCTGCGTCAACTACCTCCGCTCCATGCTTTTCGCGCTTTTGCAAACCCTTGGTCTGTGCCGATTTCACTCCGACCAGATCGTCGACGAGCGCTTCCTCGCCGCCGTCGGATCCGGCCTCGCCGGACTCATCATGCTCTCCGATCAGCTAACTCTCAGCAGCCAATTCTTCCACCACCACCACGCCGGCGCCGGCGGCCACGACCACCACCCCTGCGTCGTGTGCCAGGCCACCTTCGAGGACGGCGACCAGGTCCGCATGCTCCCCTGCCGCCACGTCTTCCACCGCCGCTGCTTCGACGGCTGGCTCCACCACTACAAGTTTAACTGCCCACTCTGCCGCTCACCGCTCTTCTCCGACGAGCGCGTGGCCGTCACAGAGCGCCGCCTCGGCCAGCAACTCATCTCTTGGTTCTCTCTTCACTGA | 498 | 0.6225 | MGLQNQLNDVSSGSIPLLVLAQIATCVNYLRSMLFALLQTLGLCRFHSDQIVDERFLAAVGSGLAGLIMLSDQLTLSSQFFHHHHAGAGGHDHHPCVVCQATFEDGDQVRMLPCRHVFHRRCFDGWLHHYKFNCPLCRSPLFSDERVAVTERRLGQQLISWFSLH* | 166 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso20g0974 | 165 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHA2A | 1 | 163 | - | - | |
Gso20g0974 | 165 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 1 | 163 | - | - | |
Gso20g0974 | 165 | ProSiteProfiles | Zinc finger RING-type profile. | 96 | 138 | IPR001841 | - | |
Gso20g0974 | 165 | SUPERFAMILY | RING/U-box | 95 | 144 | - | - | |
Gso20g0974 | 165 | SMART | ring_2 | 96 | 137 | IPR001841 | - | |
Gso20g0974 | 165 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 75 | 147 | IPR013083 | - | |
Gso20g0974 | 165 | Pfam | Ring finger domain | 96 | 138 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso20g0974 | Gso-Chr20 | 39482296 | 39483269 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso20g0974 | 1 | 165 | C3H Transcription Factor Family | AT1G15100 | 47.273 | 6.16e-45 | 143 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso20g0974 | K16282 | - | gmx:100797628 | 330.102 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso20g0974 | 20 | 39482296 | 39483269 | Gso10g2387 | 10 | 50749456 | 50750415 | GST |