Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0972 ATGGAGAAGGTTTGTGAATTCTGCACAGCTTTGAGGCCACTTGTTTACTGTAAGGCTGATGCAGCATATCTTTGTCTATCCTGTGATTCAAAGGTGCATTTAGCAAATGCAGTGTCTGGTCGGCACCTCCGGAACTTTGTGTGCCACTCATGCGGATACCATCTTGCTTATGTTCTGTGTTTGGAACATAAAATGTTGATCTGTCGTGACTGTGATCAAAAGTTGCATAACATTTCTTTACCACATAAGAAACGAGCTATCAGAAGTTTCATGGGCTGCCCTTCTGCTAAAGACTTTGCAGCACTCTGGGGGTTTGAATCGAATGAGATTGAAAACAGTGCCACTCAGGATCAGTTTGGTTCAGTTTCTTGTGTTTCTGCAGATTTGAATGTTGCACAAGTTTCAGGAATGCCTGGCATTCAAACTGGGATCCCCTCAATGCCATCTGGAGCCAAATTTGATGGGGGAGGATCAACCAGTCAACAAGGTCAGATATTGTACAGTGATCAAGAGCGACAAACTATTCTGCAGCAGATTATTGATTTAAAAATGCTTCAACAAAATGAGGACATTGATTATCTTGCAAAGATCAATAGGCTACAAGAAAAAGATTTATCTCCTTCAGTATATCACACTCTTAAGAAATTGGACGACAAATTCAATGAGCAAGCACAAAAGTCCCAGGATCTTGCTACTAATGTTCTGGAAAAAGACTGTCCCACTGTGGAGCTGAATCCTGAAACTTTGCCTTCTACATTTTCTCAATTTGACAATTTATATTCTTCTTCAATTATCGATCTTCCCTTGCATGGAGAGTTGTTCTGGACATGCCGAAGTCCACTTCAAAGTAATCAGTTGTGGTCCCAAAATATTCAAGACCTTGGGATATGCAAAGAACTTGTTTGTCAAGACGATTTTAACATCCCTGATGTTGACTTAACTTTCCAAAACTTTGAGGAACTATTTGGAGGAGATCAAGATCCAATTAGAATACTGCTTGATGATCAAGATGTCTCCTGCTCTTCTTTAGAGAAGGATAAGTCAGTTGGCAAGTCAGATATTGACAATCCAAGTGCAATGGAGGAATCTTCTGCAGCTGCGTCTATTACTATCTCCCAATCTGATCTTGACAACAAGGATATGAATCCTCTCAGCCAGTACCGTCCAAGAAGCATGGATCCCGCCCTTGCAATTCGACCATTTGATTCAACCATACCATTCTCCGTTTTGAGATTCAATGAGGAAAGCAGTTGCACTAGCCATGATGACAGTGCCCTTTCTCCCTACAGTGAAAGGAAGGCTTATTCAGGTAGTTAA 1317 0.4108 MEKVCEFCTALRPLVYCKADAAYLCLSCDSKVHLANAVSGRHLRNFVCHSCGYHLAYVLCLEHKMLICRDCDQKLHNISLPHKKRAIRSFMGCPSAKDFAALWGFESNEIENSATQDQFGSVSCVSADLNVAQVSGMPGIQTGIPSMPSGAKFDGGGSTSQQGQILYSDQERQTILQQIIDLKMLQQNEDIDYLAKINRLQEKDLSPSVYHTLKKLDDKFNEQAQKSQDLATNVLEKDCPTVELNPETLPSTFSQFDNLYSSSIIDLPLHGELFWTCRSPLQSNQLWSQNIQDLGICKELVCQDDFNIPDVDLTFQNFEELFGGDQDPIRILLDDQDVSCSSLEKDKSVGKSDIDNPSAMEESSAAASITISQSDLDNKDMNPLSQYRPRSMDPALAIRPFDSTIPFSVLRFNEESSCTSHDDSALSPYSERKAYSGS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0972 438 MobiDBLite consensus disorder prediction 357 385 - -
Gso20g0972 438 SMART bboxneu5 1 47 IPR000315 GO:0008270
Gso20g0972 438 SMART bboxneu5 48 87 IPR000315 GO:0008270
Gso20g0972 438 MobiDBLite consensus disorder prediction 416 438 - -
Gso20g0972 438 CDD Bbox1_BBX-like 4 44 - -
Gso20g0972 438 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 422 - -
Gso20g0972 438 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 422 - -
Gso20g0972 438 MobiDBLite consensus disorder prediction 344 391 - -
Gso20g0972 438 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0972 Gso-Chr20 39428134 39434169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0972 1 329 C2C2-CO-like Transcription Factor Family AT1G68190 36.637 2.95e-60 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0972 - - gmx:100796028 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0972 20 39428134 39434169 Gso10g2389 10 50784726 50792481 GST