Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0965 ATGGAGGCGCAACCGCCAACCCCCTCGACCGCCCCGCCGCCTCCGCCGCAGCACCTCAGCTACCCCGACTCCGTGGAATCCTCGCCACGCTCCCGCAACACCGACTCCTGGGACGAGCCCTTCGCGCCGGCGTCGACGAAGCTCCGCCTCATGTGCAGCTACGGCGGCCATATCGTCCCCCGCCCCCACGACAAGTCCCTCTGCTACGTCGGCGGCGACACGCGCATCATCGTCTCCGAACGCGCCACCTCACTCGCGGACCTCTCCACGCGCCTCTCGAAAACATTCCTGAATGGAAGACCCTTCACGCTCAAGTACCAGCTCCCCAACGAGGACCTCGATTCCCTCATCTCCGTCACCACCGACGAGGACCTCGAGAACATGATCGACGAGTATGACCGCACCTCCGCCGCCGCCACCTCCGCCGTCAAACCCTCTCGCATCCGCCTCTTCCTCTTCCCCACCAAACCCGAATCCACTCACTCTATCCCTGCCCAAATTCTCGACACGTCAGCCAAATCGGACGATTGGTTTTTGAATGCTTTAAACGGCGCCGGATTGCTTAACCGCGGGTTTTCGGACTCTGCCTCTGTTAATTGCCTTCTTGGACTTGACGACGAGGTTGCCGGGAACAACCTCGAACCCGGTTCGAAGGACGGTGTGGATGGTGGTGTTGGCGGTGGTGGTGCTTCGCAGGGTGGATCTTTCGGGAACGGGAAGAATTTGAAGCAGGATGTTCACTCCGTTCCTGATTCGCCCATGCTCGAAACGACGTCGTCGTTTGGGTCCACTTCCTCGTCGCCTTCGCTCGCGAACTTGCCGCCGATTAGGGTTCATGTCGTGGAGGATCAGAGGGTGTTGGGGATTGAGGATCAGTTCGCGCAGATAGGGGTTGGTGTGGGGCCGAAGCAGCAGCCGGATGAGGGTTTTGTTTTGCTCTCTTCGCCGCCTCCGCCGCCGGTTCCCGCGACTCTCGCCGCGGTGGGTGTGCCGATTGGGCCCGCCACGGTGGTTGCTGGGGAGCATCATAACCGCGTTGTCTCCGATGATGAGAGATCGGACCATGGGGTTCCTGTTGGGTATAGAAAACCACCCACTCCTCAACCACAGGTTCAGTCACAGACACAAGCACAGTCACAGGCACAAACGCAAACACTTGCTCCTCAATTTCATCAGAAGTCAACTGCTGGTGGCGCCGTTGTTGATTTGCCTTCTCCTGATTCAGTTTCTAGTGATAGTAGCCTTGCGAATGCAATCTCGCGTTCAAAAGCTGCTGTATATCAAGAACAAGTTCAGATTCAACCTGGCACTACAAGGGTTCCTAGTAACCCTGTGGATCCGAAGCTTAATGTGTCTGATCTGCATGGTCGGATCCAGATGCAGCAACATGTACATGACCCCGGATATTTGTTGCAACAGCAATTTGAACAGCACCAGCAGCTGCAATCACAACCGCAACAGCAATTTGAACAGCACCAGCAGCTGCAATCACAACCGCAACATCAATTTGAACAGCACCAACACCAACACCAACAGACACTGCCGCAACAGCAGCAACAGTTTATTCATGGCGCACACTTTATTCACCATAACCCTGCTATTCCTGCATATTATCCTGTATATCCTTCCCAGCAACATCCCCAGCATCCCCAGGTTTACTATGTGACCACGAGACAGGCGCAGGCTTACAACCTGCCTCTGCAGCAGGCTAATATGGGCGAGTCTGCAGGGAACATCGCTTCTAGCCGGCCACAAACTCCACCAAATCCTTCTACATTGGTTCAACAGCCTGCTACTTACAACCCTATTAGAAATGCTCCCATGCCTAAAACTGAAATGAATGCTTACAGAGCTGCAACTGCAGGCAACCCTCAACTAGTTCAAGTTCCTACAAGCCAACATCAGCAGCAATATGTCACCTACTCACAGATTCACCATCCTTCTCAGTCCATGGCTCCCAATTCTGCTGCCCCTGCGAATTATGCTTTTGATTATGCGGATCCTGCTCATGCTCAAATATACTACTCTCAACCTATGGCACCCACAATTCCTTCACAGTACCAGACTATGACTGCTGCTGCTGTGATGATGCAGGAAGGTTCAGCTCAGCATCCCTCAGACAGCGTGAAGCAGCAGCAGCAGATAAGAACCTCACAACCATTATAA 2166 0.5452 MEAQPPTPSTAPPPPPQHLSYPDSVESSPRSRNTDSWDEPFAPASTKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIIVSERATSLADLSTRLSKTFLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTSAAATSAVKPSRIRLFLFPTKPESTHSIPAQILDTSAKSDDWFLNALNGAGLLNRGFSDSASVNCLLGLDDEVAGNNLEPGSKDGVDGGVGGGGASQGGSFGNGKNLKQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVVEDQRVLGIEDQFAQIGVGVGPKQQPDEGFVLLSSPPPPPVPATLAAVGVPIGPATVVAGEHHNRVVSDDERSDHGVPVGYRKPPTPQPQVQSQTQAQSQAQTQTLAPQFHQKSTAGGAVVDLPSPDSVSSDSSLANAISRSKAAVYQEQVQIQPGTTRVPSNPVDPKLNVSDLHGRIQMQQHVHDPGYLLQQQFEQHQQLQSQPQQQFEQHQQLQSQPQHQFEQHQHQHQQTLPQQQQQFIHGAHFIHHNPAIPAYYPVYPSQQHPQHPQVYYVTTRQAQAYNLPLQQANMGESAGNIASSRPQTPPNPSTLVQQPATYNPIRNAPMPKTEMNAYRAATAGNPQLVQVPTSQHQQQYVTYSQIHHPSQSMAPNSAAPANYAFDYADPAHAQIYYSQPMAPTIPSQYQTMTAAAVMMQEGSAQHPSDSVKQQQQIRTSQPL* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0965 721 MobiDBLite consensus disorder prediction 1 40 - -
Gso20g0965 721 MobiDBLite consensus disorder prediction 366 392 - -
Gso20g0965 721 MobiDBLite consensus disorder prediction 1 20 - -
Gso20g0965 721 MobiDBLite consensus disorder prediction 21 40 - -
Gso20g0965 721 ProSiteProfiles PB1 domain profile. 47 155 IPR000270 GO:0005515
Gso20g0965 721 MobiDBLite consensus disorder prediction 698 721 - -
Gso20g0965 721 PANTHER OS05G0427100 PROTEIN-RELATED 9 710 - -
Gso20g0965 721 SMART PB1_new 62 153 IPR000270 GO:0005515
Gso20g0965 721 PANTHER EXPRESSED PROTEIN 9 710 - -
Gso20g0965 721 MobiDBLite consensus disorder prediction 475 517 - -
Gso20g0965 721 MobiDBLite consensus disorder prediction 426 445 - -
Gso20g0965 721 Gene3D - 67 153 - -
Gso20g0965 721 CDD PB1_UP2 51 153 - -
Gso20g0965 721 MobiDBLite consensus disorder prediction 251 272 - -
Gso20g0965 721 MobiDBLite consensus disorder prediction 575 597 - -
Gso20g0965 721 MobiDBLite consensus disorder prediction 213 272 - -
Gso20g0965 721 SUPERFAMILY CAD & PB1 domains 63 163 - -
Gso20g0965 721 Pfam PB1 domain 63 154 IPR000270 GO:0005515
Gso20g0965 721 MobiDBLite consensus disorder prediction 345 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0965 Gso-Chr20 39360277 39363116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0965 44 261 MAP Kinase Kinase Kinase AT1G79570 33.186 6.72e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0965 - - gmx:100784396 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0965 20 39360277 39363116 Gso10g2394 10 50857414 50860076 GST