Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0962 ATGGAATCAAACACATCAAGGTTTCTTTTGAACTCTTCAACTTTGCACTCAGTTTTCTACCAAGAAAAACAAGATGATGGCATAATTGATCTGGGTCTTAGTCTAGGAACTGTTCGACATGAAGCTTACCATTCTTCTGCCAACTTGTATGATGAAGAGCTTATGGATTGGCCTCACTCCAATCTCAATCTCAAGAATTCAAGAACAATGCATTCTAGATCCGTCCACCAAAATTTTGATGAAGAGATAGAGGGCGTCCAGAGCAATGAGAGGTGGGCTTATGTGAAGGTTAACATGGATGGGGTTACCATTGGTAGGAAAATTTGTGTACTTGATCATGGTGGATACTCAAGTCTAGCACTCCAATTAGAAGACATGTTTGGTAGGCAGAATGATCAATAA 402 0.398 MESNTSRFLLNSSTLHSVFYQEKQDDGIIDLGLSLGTVRHEAYHSSANLYDEELMDWPHSNLNLKNSRTMHSRSVHQNFDEEIEGVQSNERWAYVKVNMDGVTIGRKICVLDHGGYSSLALQLEDMFGRQNDQ* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0962 133 PANTHER AUXIN-RESPONSIVE PROTEIN IAA34 1 131 - -
Gso20g0962 133 Gene3D - 86 133 - -
Gso20g0962 133 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 131 IPR003311 GO:0005634|GO:0006355
Gso20g0962 133 ProSiteProfiles PB1 domain profile. 92 133 IPR000270 GO:0005515
Gso20g0962 133 Pfam AUX/IAA family 51 128 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0962 Gso-Chr20 39338597 39339522 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gso20g0962 AUX_IAA 8.7e-11 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0962 K14484 - gsj:114402103 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0962 20 39338597 39339522 Gso10g2397 10 50877904 50879328 GST