Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0959 ATGGTTTCAAGATCATATTCTAACTTGTTAGATCTTACTTCTTGTGGCTCCCCAACTTTCGGCCGTGAGAAGAAAAGGCTCCCTCGAGTGGCAACTGTTGCTGGAGTACTGTCTGAACTAGATGATGAGACCAGCAACAGTGTTTGCTCTGATACTCCATCCTCAGTCTCTCAAGAGAGGATGATCATTGTTGGTAACCAGCTTCCATTAAAGGCACACAGAAAAGACAATGGTACTTGGGAGTTCACATGGGATGAGGATTCACTTCTTTTACAGCTGAAAGATGGTCTTGGGGATGATGTGGAAACTATATATATTGGTTGTCTTAAAGAAGAGATTGAGCCAAGTGAGCAAGATGATGTTGCTCAGTACTTGCTTGACACTTTCAAATGCGTGCCAACGTTCCTCCCTCCTGAGCTTTTTAGTAAATTCTATCATGGATTCTGCAAACAACATCTATGGCCTTTGTTTCACTACATGCTTCCACTGTCACCTGATCTTGGCGGTCGTTTTGATAGGTCCCTTTGGCAAGCTTATCTCTCTGTGAACAAGATATTTGCGGATAAAGTGATGGAAGTCATTAGCCCTGATGATGACTTTGTGTGGGTTCATGACTACCATTTGATGGTACTTCCAACATTTTTGAGAAAGAGATTTAACAGGGTGAGGCTAGGATTCTTCCTCCATAGTCCATTTCCTTCGTCTGAGATATACCGAACTCTTCCTGTTAGGGATGAACTTCTTAGAGCTCTTCTGAATTCGGACCTTATTGGGTTTCATACATTTGATTATGCCAGGCATTTCCTCTCCTGTTGCAGTAGAATGCTTGGGATTTCTTACCAATCCAAGCGTGGCTACATTGGCCTTGAGTACTATGGAAGAACTGTAAGCATTAAGATTCTTCCTGTTGGTATTCACATAGGTCAGCTCCAATCAGTCATGAGTCATCCCGAGACAGAAAGCAAGGTTGCGGAGTTAAAAAAACAGTTCAGAGATCAGACTGTGCTGCTTGGGGTCGATGACATGGATATATTCAAAGGAATCAGCTTAAAACTTTTGGCCATGGAACAATTGCTTTTACAACATCCTGATAAGAGGGGCAGAGTTGTTCTGGTCCAAATTGCTAACCCTGCAAGAGGTCGCGGAAAAGATGTGCAGGAGGTACAAAGTGAAACTTATGCCACGGTGAAGAGGATAAATAATACATTTGGAAGGCCTGGATACACACCTGTAGTCTTGATTGATACACCACTTCAGAGTTATGAGCGAATTGCTTATTATGTGATTGCAGAATGTTGCCTTGTTACAGCAGTGAGAGATGGCATGAACCTTATACCTTATGAATATATCATTTGTAGGCAAGGAAGTGAGAAGATAGATGAGATTTTAGGGACAGACCCGCTTACTCAAAAGAGGAGTATGCTGGTGGTGTCTGAGTTTATTGGCTGCTCCCCTTCATTAAGTGGGGCAATTCGAGTGAATCCATGGAACATTGATTCTGTCGCTGAAGCTATGGATTCTGCATTGATGGTCCCAGAGGCTGAAAAGCAGATGCGGCATGAGAAGCATTATAGATATGTCAGTACACATGATGTTGCTTATTGGGCACGTAGCTTCTTGCAGGATCTGGAAAGGGCATGTAGAGATCATCTGAGGAGGAGATGCTGGGGAATTGGTTTTGGTTTAGGCTTCCGAGTGATTGCTTTGGATCCAAACTTTAGAAAGCTATCTGTGGAACATATTGTTTCAGCTTATAAGAGGACCAAGCACCGAGCAATTCTTTTGGATTATGATGGCACTATGGTGCAGCCTGGGTCGATGAGTACAACGCCTAATGCTGAAGCCGTTAGCATCTTGAACATCTTGTGCAGGGACACCAAGAATCATGTTTTCATTGTAAGTGGAAGGGAGAGAAAGACTCTTACTGAATGGTTTTCTTCTTGTGAAAGGATGGGAATCGCTGCAGAGCATGGTTATTTTGTGAGGACAAATCAAAATGCAGAATGGGAAACTTGTGTTCCAGTACCCGATTTTGAGTGGAAACAGATTGCTGAGCCGGTTATGCAGTTATATATGGAAACAACTGATGGTTCTAACATAGATGCCAAAGAAAGTGCTCTAGTTTGGAATTACGAGTATGCAGACCGGGACTTTGGTTCATGCCAAGCTAAAGAGCTTTTTGATCATCTGGAAAGTGTTCTTGCCAATGAGCCTGTTTCTGTTAAGAGTAGTCCAAACATTGTGGAAGTAAAACCTCAGGGTGTGAGTAAGGGAATCGTAGCAGAACGTCTTCTCTTAACAATGCAACAAAGGGGAGTGATTCCAGATTTTGTTCTATGCATTGGAGATGACAGATCAGACGAGGACATGTTTGGGGTAATCATGAATGCAAAGGCAACCCTATCTCCAGTTGCTGAAGTGTTCCCATGCACTGTTGGCCAGAAACCTAGCAAGGCCAAGTATTATTTGGAAGACACAAGTGAGATTTTGAGAATGTTGCAAGGCCTTGCCAATGCTTCTGAGCACTCTGCTAGAATTTTGCAACCAGCTTCTCATTAA 2559 0.4291 MVSRSYSNLLDLTSCGSPTFGREKKRLPRVATVAGVLSELDDETSNSVCSDTPSSVSQERMIIVGNQLPLKAHRKDNGTWEFTWDEDSLLLQLKDGLGDDVETIYIGCLKEEIEPSEQDDVAQYLLDTFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVRLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGISYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQSVMSHPETESKVAELKKQFRDQTVLLGVDDMDIFKGISLKLLAMEQLLLQHPDKRGRVVLVQIANPARGRGKDVQEVQSETYATVKRINNTFGRPGYTPVVLIDTPLQSYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGSEKIDEILGTDPLTQKRSMLVVSEFIGCSPSLSGAIRVNPWNIDSVAEAMDSALMVPEAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKHRAILLDYDGTMVQPGSMSTTPNAEAVSILNILCRDTKNHVFIVSGRERKTLTEWFSSCERMGIAAEHGYFVRTNQNAEWETCVPVPDFEWKQIAEPVMQLYMETTDGSNIDAKESALVWNYEYADRDFGSCQAKELFDHLESVLANEPVSVKSSPNIVEVKPQGVSKGIVAERLLLTMQQRGVIPDFVLCIGDDRSDEDMFGVIMNAKATLSPVAEVFPCTVGQKPSKAKYYLEDTSEILRMLQGLANASEHSARILQPASH* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0959 852 Pfam Glycosyltransferase family 20 60 544 IPR001830 GO:0003824|GO:0005992
Gso20g0959 852 Gene3D - 590 699 IPR023214 -
Gso20g0959 852 Gene3D - 716 848 IPR023214 -
Gso20g0959 852 Gene3D Glycogen Phosphorylase B; 312 528 - -
Gso20g0959 852 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 593 795 IPR006379 -
Gso20g0959 852 Gene3D Glycogen Phosphorylase B; 53 311 - -
Gso20g0959 852 CDD HAD_TPP 592 828 - -
Gso20g0959 852 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 548 - -
Gso20g0959 852 TIGRFAM T6PP: trehalose-phosphatase 589 837 IPR003337 GO:0003824|GO:0005992
Gso20g0959 852 SUPERFAMILY HAD-like 591 837 IPR036412 -
Gso20g0959 852 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 843 IPR001830 GO:0003824|GO:0005992
Gso20g0959 852 Pfam Trehalose-phosphatase 594 827 IPR003337 GO:0003824|GO:0005992
Gso20g0959 852 CDD GT20_TPS 60 544 IPR001830 GO:0003824|GO:0005992
Gso20g0959 852 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0959 Gso-Chr20 39302652 39307457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0959 1 837 Trehalose Biosynthesis Gene Families AT4G17770 79.762 0.0 1429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0959 K16055 - gmx:100782799 1717.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0959 20 39302652 39307457 Gso10g2400 10 50902583 50907631 GST