Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0952 ATGGCTCTAGTTGATTTGTTCTGCTTCCTCTTGTTTTGTCACCTTGTACTCATTCTCTCCGCTGGTTATGGAAATGGGCACCAAGATTGTCCACACTCCTTTACTTGTGGTAATCTTGGAACTTTCCATTACCCTTTCACCAAGGCAGAAAAACCTGACTGTGGCTTGCTAGCCATACATGATTGTGATAATCCTCATCAACACAGAAAAATGATCCAGCTCGAGAAAAATGGAAAAGGCATAGTGCTTACAGGCGTGGCTCAGCAGAATGCGATTTCAATTTTGGATGAAGATTTTCACAAGCGTTTACAACAAAACCCTTGTGGCACTTTGAAGAATAATTATAGTCTTCCTTCCCCTTTTTCTTCTTTGTATTCTATTCACATAAAATTCAATGTAACACTGTTCAAATGCAAACAAAGCCTCAAAATGAAACCGCCAACACATTATTTTAATCACCCGTGCCCTGAATATGATTATGATATATATTATGACAGCCTTCCCACTCCTAATAGTAAGGAGGCGCATAGCCTTTTCTCATCCTGCTCAGTTATTCAGATATCAACAAAAGACTTGACTGATACCAATGACATTCTGTCGTTTGTATCTGCTGAGATGGTTCTTCAAGTAGTATTATCTAATGATTGTGATCAGTGCTATAATCACAGGGGAGGCCAATGTCGGCTTGACGCCAATAAAAAGTTCTACTGTAAAGAAGGACCAAAGAATAAGAGTAGTAAAAGTTTGAAGCTGATACTTGGACTTGTAACAGGTTTAAGTGTTATATTGTCAGCTATTCTGATCATTGGATACATAGTATTTAGACGGAAATATACTCCATCACACCCCCAATCCCAATCAAGAAACACATATGTTGATGTAATTGGTCCGAGCTCAAATCCTGATCCAGAAAACGGCAGGTTCTACTTTGGAGTCCCTCTCTTCTCTTACAAGGAGCTTCAAAAAGCTACATATAATTTCCACCACGCCAGACAACTTGGAAGTGGAGGCTTTGGAACAGTTTACTATGGAAAACTGCAAGATGGACGAGAAGTTGCTATCAAGCGTCTATATGAGCACAACTACAGGCGAGTAGAACAGTTCATGAACGAAGTTCAAATCCTCACACGCTTGCGCCATAAAAATCTGGTGTCCCTCTATGGCTGCACTTCAAGTCACAGCCGTGAACTACTCCTTGTGTATGAGCATGTTCCAAATGGCACTGTTGCTTGCCACCTCCACGGTGAGTTAGCAAGGCGCGACACTCTTCCATGGCACACAAGAATGAAAATTGCCATAGAGACCGCAAGTGCACTGTCTTATCTCCATGCTTCTGACATCATCCACCGCGATGTCAAGACCAAGAACATTCTCCTTAACGAAAGTTTCAGTGTTAAGGTTGCGGACTTTGGTCTTTCAAGGTTGTTCCCTAACGATGTTACGCATGTTTCCACTGCTCCACTAGGAACCCCAGGTTACGTTGATCCAGAATATCACCAATGCTACCAGCTCACAAACAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTATTGAGCTATTATCATCTATGCCAGCTATTGATATGACAAGGCGTAGGGATGAGATTAACTTGTCAAATCTAGCCATAAATAAGATTCAGCAAAGTGCATTTAGTGAGCTGGTTGATCCTTGTCTTGGTTTTGATTCAGATAGTGAGGTAAAGAGGATGATGGTTTCGGTGGCAGAATTAGCTTTTCAGTGTTTGCAACGGGACAAGGAATTGAGACCCTCTATGGACGAGGTTTTGAAGGTGCTGATGAGAATTGAAACTGGGAAGGATATGGGTGAGCATCTAGATGATGAAGAAGATTTACGTCCCCCTTCTCTACCTTCACCAGATTGGGATGAGAATGGATTAGTGAGAAAAATGATGGTTCATCCTTCACCTAAAGCCGTCACTGATACATGGCACAGTGAGTCTACTACGCCTAATGGCAGTGGGTAA 1986 0.4184 MALVDLFCFLLFCHLVLILSAGYGNGHQDCPHSFTCGNLGTFHYPFTKAEKPDCGLLAIHDCDNPHQHRKMIQLEKNGKGIVLTGVAQQNAISILDEDFHKRLQQNPCGTLKNNYSLPSPFSSLYSIHIKFNVTLFKCKQSLKMKPPTHYFNHPCPEYDYDIYYDSLPTPNSKEAHSLFSSCSVIQISTKDLTDTNDILSFVSAEMVLQVVLSNDCDQCYNHRGGQCRLDANKKFYCKEGPKNKSSKSLKLILGLVTGLSVILSAILIIGYIVFRRKYTPSHPQSQSRNTYVDVIGPSSNPDPENGRFYFGVPLFSYKELQKATYNFHHARQLGSGGFGTVYYGKLQDGREVAIKRLYEHNYRRVEQFMNEVQILTRLRHKNLVSLYGCTSSHSRELLLVYEHVPNGTVACHLHGELARRDTLPWHTRMKIAIETASALSYLHASDIIHRDVKTKNILLNESFSVKVADFGLSRLFPNDVTHVSTAPLGTPGYVDPEYHQCYQLTNKSDVYSFGVVLIELLSSMPAIDMTRRRDEINLSNLAINKIQQSAFSELVDPCLGFDSDSEVKRMMVSVAELAFQCLQRDKELRPSMDEVLKVLMRIETGKDMGEHLDDEEDLRPPSLPSPDWDENGLVRKMMVHPSPKAVTDTWHSESTTPNGSG* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0952 661 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 7 660 - -
Gso20g0952 661 MobiDBLite consensus disorder prediction 609 623 - -
Gso20g0952 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Gso20g0952 661 ProSiteProfiles Protein kinase domain profile. 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0952 661 MobiDBLite consensus disorder prediction 609 661 - -
Gso20g0952 661 MobiDBLite consensus disorder prediction 647 661 - -
Gso20g0952 661 Gene3D Phosphorylase Kinase; domain 1 304 403 - -
Gso20g0952 661 Pfam Protein kinase domain 327 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0952 661 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 660 IPR044652 -
Gso20g0952 661 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Gso20g0952 661 Gene3D Transferase(Phosphotransferase) domain 1 404 614 - -
Gso20g0952 661 SMART serkin_6 327 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0952 661 SUPERFAMILY Protein kinase-like (PK-like) 309 599 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0952 Gso-Chr20 39224809 39228022 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0952 34 661 Receptor kinase-like Gene Family AT1G25390 49.921 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso20g0952 Pkinase 7.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0952 - - gmx:100791822 1328.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0952 20 39224809 39228022 Gso10g2405 10 50969369 50973352 GST